Gene M446_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2079 
Symbol 
ID6134820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2321410 
End bp2322210 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content72% 
IMG OID641642308 
Producthypothetical protein 
Protein accessionYP_001768976 
Protein GI170740321 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0289282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG CTGGGTACGC AAAGCCCTAT CTTGGGGTCG GTCTCGCGGC GTTCATGGTC 
GCGGCGGGCG CGGCCGAGGC CGCCCAGTGC GGCAACGGTC CGGGCGGGTT CGAGGCGTGG
AAGCGGGAAT TCGCCGAGGA GGCGCGGGGC CGGGCGAGCG CGGCGAGCCT CCAGGCGCTG
ATGGGCACCT CCTACTCCTC CCCCACCATC GCGGCGGATC GCGGCCAGAA GAGCTTCCGG
CTCTCGCTGG AGCAGTTCAT GGCCAAGCGC GGCGGGCCGG CCATCGTCTC GCGCGGGCGG
GCGCTGAGGG CCTCGAACGC CGCCCTGTTC GCCGGGATCG AGCAGCGCTA CGGCGTGCCG
CCCGGGCCGC TCCTGGCGAT CTGGGGCATG GAGACGGGCT TCGGCGCCGT GAAGGGCAAC
GTGAACACCC TCTCGGCGGT GGCGACGCTC GCCTACGATT GCCGCCGCTC GGCCTATTTC
ACGGACCAGC TCTACGCCGC GCTGGCGCTG ATCGACCGGG GCGTCATGTC GCCGAGCACC
CGCGGCGCCG CGCATGGCGA GGTCGGCCAC ACCCAGTTCC TGCCCAAGAA CGTGCTGAAT
TACGGCACGG GCGGCAGCCT CGACAACGTG TCGAACGCGC TCAATTCGAC GGCGAACTTC
CTGCGCGCGC ATGGCTGGCA GCGCGGCGCC GGCTACCAGC CGGGCGAGCC GAACTTCGCG
GCGATCCAGG GCTGGAACGC CGCCTCCGTC TACCAGCGCG CCATCGCCAT CATCGGCAAG
CGCATCGACG GAGGGGAGTA G
 
Protein sequence
MSGAGYAKPY LGVGLAAFMV AAGAAEAAQC GNGPGGFEAW KREFAEEARG RASAASLQAL 
MGTSYSSPTI AADRGQKSFR LSLEQFMAKR GGPAIVSRGR ALRASNAALF AGIEQRYGVP
PGPLLAIWGM ETGFGAVKGN VNTLSAVATL AYDCRRSAYF TDQLYAALAL IDRGVMSPST
RGAAHGEVGH TQFLPKNVLN YGTGGSLDNV SNALNSTANF LRAHGWQRGA GYQPGEPNFA
AIQGWNAASV YQRAIAIIGK RIDGGE