Gene M446_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2016 
Symbol 
ID6129564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2251622 
End bp2252308 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content77% 
IMG OID641642246 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001768914 
Protein GI170740259 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.140741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.18363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTATGGA GGCTCGAGCG AACGCCGAGG GGGCCGCTCC TGATCGAACT CGCGCCGGGC 
CTGATCCATT ATCCGGGCTA CCTCGACGCC GCCGGCCAGG CGGCGCTCGC CGCCGACCTC
GCCCGCGTGC TCGCGCGGGC GCCCGCCTTC ACCCCGACCA TGCCGCGGAC GGGCAAGCCC
TTCTCGGTGC GGATGACGAA TTGCGGCCGC CTCGGCTGGG TCTCGGACCA AGCCGGCTAC
CGCTACCAGC CCGCGCATCC CGGGACCGGG GCGCCCTGGC CGCCGATCCC GCCCGCCCTG
CTGGCGGCCT GGAGCGACCT CGCGGCCTAT CCCGACCCGC CGGAGGCCTG CCTCGTGAAC
CTCTACGCGC CGGGGGCCCG GATGGGGCTG CACCAGGACC GGGACGAGGA CGCGCTCGAC
GCCCCCGTGC TCTCGCTCTC CCTCGGGGCG ACGGCGCTGT TCCGCCACGG GGGCCCGCGG
CGGGGGGATC CGACCCGCTC CCTGCGCCTG CGCAGCGGCG ACGCCCTCGT CATCGGCGGC
GCCTCGCGGC TGATCTTCCA CGGCGTGGAC CGGATCGTCC CGGAGCCGCC CGACCTGCTC
GGGGCGCCGC CCCTGCCGGA GCCGGTGCCG CCGGGCGGGC GGGTGAACCT GACACTGCGA
CGCGTCACCC TGTCCGGCCG CGCTTGA
 
Protein sequence
MLWRLERTPR GPLLIELAPG LIHYPGYLDA AGQAALAADL ARVLARAPAF TPTMPRTGKP 
FSVRMTNCGR LGWVSDQAGY RYQPAHPGTG APWPPIPPAL LAAWSDLAAY PDPPEACLVN
LYAPGARMGL HQDRDEDALD APVLSLSLGA TALFRHGGPR RGDPTRSLRL RSGDALVIGG
ASRLIFHGVD RIVPEPPDLL GAPPLPEPVP PGGRVNLTLR RVTLSGRA