Gene M446_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2013 
Symbol 
ID6128990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2248598 
End bp2249983 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content70% 
IMG OID641642243 
Productamino acid permease-associated region 
Protein accessionYP_001768911 
Protein GI170740256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0847443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.208384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG CGACGGGCGG GCTGCTGCGG ACGAAGCCGC TCGCGCGGCT CAACGCCGAC 
GCGGCGGCGG GCGAGAACGG GCTCCACCGC AGCCTCGGCC CCTGGAGTCT CGTGGGGCTC
GGGATCGGGG CGATCATCGG GGCGGGCCTG TTCTCGCTCG CCGGCATCGC GGCGGCCGAG
CATGCCGGGC CGGCGGTCGT CATCTCCTTC GCCATCGCGG CCCTCTGCTG CGCCTTCGCG
GGCATGTGCT ACAGCGAACT CGCCAGCATG ATCCCGGTCT CGGGCAGCGC CTACACCTAC
GCCTACGCCA CGATGGGCGA GTTCGTCGCC TGGATCATCG GCTGGGATCT CGTGCTCGAA
TACGCGGTCG GGGCCGCCAC GGTCTCGGTG AGCCGGTCGA CATCCGTCGC GACGCTGCTG
CAGGGCTGGG GCATCGCCCT GCCGCCGCGG CTGCTGCACT CGCCCTTCGA GACGGTCGCG
CTCGCCGACG GCACCCGGAC CAGCGGCCTC GTCAACCTGC CGGCGGTGCT GATCGTCTGC
GTGATCTCCC TCCGGCTGAT GCGCGGCGCG CGCGAGTCGG CCCGGGTCAA CGCCGTGGTC
GTCGTCGTCA AGGTCGCGGT GGTGCTCACC GTGAGCGGGG TGGGCCTGTT CTACGTCAAG
GCGCAGAACT ACGTCCCCTT CGTTCCGGAC GATACGGGCA CCTTCGGGGA GTACGGCTGC
AGCGGGATCA TGCGGGCGGC CGGGGTGGTG TTCTTCGCCT ATATCGGCTT CGACGCGGTC
TCGACGGCGG CACAGGAGGT GAAGAACCCC CAGCGCACCA TGATGGTGGG GATCCTCGGC
TCCCTCGCGA TCTGCACCGT CCTGTACATC GCCTTCGCGG CCGTGCTGAC CGGCCTCGTG
CGCTCCGACG CGATGCGGGG CGATGCCGCC CCGGTCGCCA CCGCCATCGC GCGCACACCC
TTCCCGTCCC TGCAGGCGCT GGTGACGCTC GGCGTCATCG CGGGCTTCAG CACCGTCATG
CTGGTGCTGC TCTACGGCCA GTCGCGGGTC TTCTACGCCA TGGCGCAGGA CCGGCTGCTG
CCGCGCTTCT TCGCGGCGAT CCACCCGACC TGGCGCACGC CCTACCGCTC GAACCTGTTC
TTCATGGTCT TCGCCGCGCT GCTCGGGGGC TATCTATTTC GGCTACGGCC GCCGCTACAG
CCGCGTCGGC CACGCCGCCC GCCCGCGGAC CCGCACGGCC TGACCACGGG CGCTCGATAC
GACCAGATCG GACTGTGTTG TTCGAAGAAA AGCGCCGCAG GCCGTGCGCC GCCACACCGC
CGCGTTGTTG AGGGGGCGCG AGACAAGGGC GGCTTCTTCG AGGAAGCTGT CAGCCTCACT
TGGTAG
 
Protein sequence
MASATGGLLR TKPLARLNAD AAAGENGLHR SLGPWSLVGL GIGAIIGAGL FSLAGIAAAE 
HAGPAVVISF AIAALCCAFA GMCYSELASM IPVSGSAYTY AYATMGEFVA WIIGWDLVLE
YAVGAATVSV SRSTSVATLL QGWGIALPPR LLHSPFETVA LADGTRTSGL VNLPAVLIVC
VISLRLMRGA RESARVNAVV VVVKVAVVLT VSGVGLFYVK AQNYVPFVPD DTGTFGEYGC
SGIMRAAGVV FFAYIGFDAV STAAQEVKNP QRTMMVGILG SLAICTVLYI AFAAVLTGLV
RSDAMRGDAA PVATAIARTP FPSLQALVTL GVIAGFSTVM LVLLYGQSRV FYAMAQDRLL
PRFFAAIHPT WRTPYRSNLF FMVFAALLGG YLFRLRPPLQ PRRPRRPPAD PHGLTTGARY
DQIGLCCSKK SAAGRAPPHR RVVEGARDKG GFFEEAVSLT W