Gene M446_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2005 
Symbol 
ID6129208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2241442 
End bp2242323 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content68% 
IMG OID641642235 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_001768903 
Protein GI170740248 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.357303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.478443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCG AGATCAAGAC CGTGGGGATC ATCGGGGCCG GCCAGATGGG CAGCGGCATC 
GCGCATGTCT GCGCGCTGTC CGGGCTCAAC GTGCGCCTCA ACGACCGCGA CCCGGAGCGC
CTGAAGAACG GGCTCGCCAC GGTGAACGGC AATCTGCAGC GCCAGGTCGG CAAGGGCACG
ATCTCGGAGG AGGGCCGCCG CACGGCGATC GAGCGGATCC TCCCGGTCGA GAGCTTCGAC
GATTTCGGCC CCTGCGACCT CGTCATCGAG GCGGCGACCG AGGACGAGGC GATCAAGCGC
ACCATCTTCT CGGCCCTGTG CCCGTCGCTG CGGCCCGAGA CGATGGTGGC GACCAACACC
TCGTCGATCT CGATCACCCG GCTCGCCGCC TCGACGGACC GGCCGGAGCG CTTCATCGGC
ATCCACTTCA TGAACCCGGT GCCGGTGATG CAGCTCGTCG AGCTGATCCG CGGCATCGCC
ACGGAGGACC CGACCTTCGA GTCGGCCCGG GCCTTCGTCA GCCGGCTCGG CAAGACCGTG
ACGGTGTCGG AGGATTTTCC GGCCTTCATC GTCAACCGCA TCCTGCTGCC GATGATCAAC
GAGGCGATCT ACACGCTCTA CGAGGGCGTC GGCTCGGTGG ATTCGATCGA CACGGCGATG
CGGCTCGGGG CGAACCACCC GATGGGGCCG CTGCAGCTCG CCGACTTCAT CGGCCTCGAC
ACCTGCCTGT CGATCATGCA GGTGCTCTAC GAGGGCTTGG CGGATTCGAA GTACCGGCCC
TGCCCGCTCC TGGTGAAGTA CGTCGAGGCC GGCTGGCTCG GCCGCAAGAC CAAGCGCGGC
TTCTACGATT ACCGCGGGCC GGAGCCGGTG CCGACGCGCT GA
 
Protein sequence
MGIEIKTVGI IGAGQMGSGI AHVCALSGLN VRLNDRDPER LKNGLATVNG NLQRQVGKGT 
ISEEGRRTAI ERILPVESFD DFGPCDLVIE AATEDEAIKR TIFSALCPSL RPETMVATNT
SSISITRLAA STDRPERFIG IHFMNPVPVM QLVELIRGIA TEDPTFESAR AFVSRLGKTV
TVSEDFPAFI VNRILLPMIN EAIYTLYEGV GSVDSIDTAM RLGANHPMGP LQLADFIGLD
TCLSIMQVLY EGLADSKYRP CPLLVKYVEA GWLGRKTKRG FYDYRGPEPV PTR