Gene M446_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1998 
Symbol 
ID6135641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2234639 
End bp2235361 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID641642229 
Producttwo component transcriptional regulator 
Protein accessionYP_001768897 
Protein GI170740242 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0541046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0777049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCG CCGCCCAGCG GATCTACGTG GTCGACGACG AGCCGGACGC CCGCGCGATG 
GTCGGCGACT ACCTGCGCCT GCACGGGTTC GAGGTGGATC TCTGCGACGG CGGCGCCTCC
CTGCGCCGCC TTCTCGCCGC GCGCCCCCCC GACCTCATCG TCCTCGACCT CAACATGCCG
GACGAGGACG GGCTCTCCAT CGTGCGGGAC CTCAAGGCGC GCAGTCAGAT CCCCATCATC
ATGCTCACCG CCACGGCGAG TCCCATCGAC CGGGTGGTCG GCCTCGAACT CGGGGCCGAC
GACTACCTGC CCAAGCCCTG CGAGCTGCGC GAGCTCGTGG CCCGGGTGCG CTCCGTCCTG
CGCCGCGCCG CGCAGACCCG TCCGGCCGGG GCGCCCGAGC CCCGCGAGCC CGGCGGCGTC
CGCTTCGGGC GGATGCGGGT CGATACCGAG ACCCTGCGGC TGCGCGACGA GAGCGGGGCC
GAGCAGCTCC TCACCCGCTC CGAATTCGCC CTGCTCAAGG CCTTCCTCGA CAATCCCAAG
CGGGTGATGA GCCGCGAGCG GCTCCTCGAC CTCGCCGATG CCCGCGACCC GGACGCCTTC
GACCGCGCCA TCGACGTGCG GATCAACCGC ATCCGCAAGA AGATCGAGCC CGATCCGGCC
AACCCCCGCT TCATCAAGAC CGTGCGCGGC CTCGGCTACG TGTTCCGTCC CGACGGCGAT
TGA
 
Protein sequence
MTGAAQRIYV VDDEPDARAM VGDYLRLHGF EVDLCDGGAS LRRLLAARPP DLIVLDLNMP 
DEDGLSIVRD LKARSQIPII MLTATASPID RVVGLELGAD DYLPKPCELR ELVARVRSVL
RRAAQTRPAG APEPREPGGV RFGRMRVDTE TLRLRDESGA EQLLTRSEFA LLKAFLDNPK
RVMSRERLLD LADARDPDAF DRAIDVRINR IRKKIEPDPA NPRFIKTVRG LGYVFRPDGD