Gene M446_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1994 
Symbol 
ID6135637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2229209 
End bp2230291 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content75% 
IMG OID641642225 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_001768893 
Protein GI170740238 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.316858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.644393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA GCGCGGGGCG ACGAGGCTGG CTGGGGCGCG TCCGGGCGCG GGGCGTCGGC 
GCGTCCCTGA TGCTGTTCGC GGCCACCGGG GCTGGCGCCG CGCAAACCCC CCTGGCGCTG
CGCGTGGTCG GCGGCCTCGC CGGCGTCCGG CAATTCACCC AGTTCGAGGA GCCGTTCTGG
TCGCGCGAGA TCGCGGAGCG CTCGGGCGGG CGCGTCGTCG CCAGCATCCA CGCCTTCGAC
CGCAGCGGCC TGCGCGGCGA GGACATGCTG CAGCTGATGC GGCTCGGCGT CGTCCCGTTC
GGCACGGTGC TCCTGTCCCT CGCCGCCGGA GAGGACCCGG AGCTGACCGC GGTCGACCTG
CCCGGCCTGA ACCCCGACAC GCGGGCGCTG CGGCGCAGCC TGGCGGCCTT CCGCCCGCAT
ATGCGGCGGG TGCTGGACGA GCGCTACGGC ATCGAGCTCC TCGGCGTCTA CGCCTATCCG
GCGCAGGTGC TCTACTGCGC CGAGGCGTTC CGGGGCCTCG ACGACCTGGC GGGGCGCCGG
GTGCGCATCT CCTCGGTGAA CCAGTCCGAG TTCGTGCGGG CGCTCAGGGG GGTGCCGATC
ATCGTCCCGT TCAGCGAGAC GACCGGCGCG GTGGCGCGCG GCGTGGCGGA TTGCGCGATC
ACCGGCACCC TGAGCGGCCT GGAGATCGGG CTGACGGCGG TGACCTCCCA CGTCCACGCG
CTGCCGATCA ACTGGGGGCT CTCGATCTTC GGCGCCAACC GCGACGCCTG GGGCGCCATC
GCGCCGGACC TGCGCGAGGC GATCCGGCGC GGGGTCGGTG ACCTCGAGGA GCGCATCTGG
CGCATGGCCG AGGCGGACAC GGCCCGGGGC CTCGCCTGCA GCACCGGGGC GGCGGAGTGC
CCGCCCGGGT CGCGGGCCGG TCTCACCCTC GTGCCGGTCA GCGCGGAGGA CGAGGAGCGC
CGCCTGCGCC TCCTCCAGCG CCGGGTGCTG CCGGACTGGA TCGAGCGCTG CGGCCGCGAT
TGCGGCGCCG CCTGGAACGC CGCGCTCGCC GCCACGACCG GGATCCGGGC CGATGAGCGC
TGA
 
Protein sequence
MSVSAGRRGW LGRVRARGVG ASLMLFAATG AGAAQTPLAL RVVGGLAGVR QFTQFEEPFW 
SREIAERSGG RVVASIHAFD RSGLRGEDML QLMRLGVVPF GTVLLSLAAG EDPELTAVDL
PGLNPDTRAL RRSLAAFRPH MRRVLDERYG IELLGVYAYP AQVLYCAEAF RGLDDLAGRR
VRISSVNQSE FVRALRGVPI IVPFSETTGA VARGVADCAI TGTLSGLEIG LTAVTSHVHA
LPINWGLSIF GANRDAWGAI APDLREAIRR GVGDLEERIW RMAEADTARG LACSTGAAEC
PPGSRAGLTL VPVSAEDEER RLRLLQRRVL PDWIERCGRD CGAAWNAALA ATTGIRADER