| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1993 |
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| Symbol | |
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| ID | 6135636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 2226115 |
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| End bp | 2229219 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641642224 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001768892 |
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| Protein GI | 170740237 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.717773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.933886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG AGGCGGCCCG CGCCAGGCTG CCGCGGCGCC TCGTCCTGAC GGTGCTGGGC
GTCGTCGCGC TGGTGTCCGG CGCGCTGCTC GGGGGCAGCG TCCTCCTGCT GCAGCAGACC
CACGAGACCG TCCGGGTGGC GGCGGAGCGC TCGGTCGAGC GCACCGCCCA GACCCTGGCC
CACACGATCA ACCGGCAGTT CCTGCAGATC GACAGCGCGC TCGCGAGCCT GCCGGTCCTG
CTCTCGACGC TGGCCGCGAC GCCGGGGGCG ATCTCGCCCG AACGGGCGGG CCGGCTCCTG
CGCGGCCTCA ACGTGCAGAG CTTCGCCTTC CGCGACCTGA TGCTGGTGCG GCGCGACGGC
ACGCTGTGGA CGTCGGCCCG CGCCCGCTCG GCCCGCTTCC CGCTCGACGA AACGATCCCG
GACCGCAGCC GGGGCATGAT GACCCTGGCC GGCCCGACCC ACAACCGGCG CACGGGCGAG
TGGGTGCTCC ACCTCGCCCG CACCGTCACG CTGCCGGGCG AGGGCGAGCT CGTGGCCGTG
GCCGAGGTGC CGCTCTCCTC CGTGCAGGGC CTGCTCGCCG AGGCGGGCGA CGCGCCCGGG
CAGCGGGTGA CGCTCGAGCG CGCGGACGGG CGGCTGCTGG CGAGCCTGCC GCACGATGAA
CTCGCCACCG GCCGGATCCT GCCCCAGCGG ATCAGCGCGC GGGAGCGCGA CGACCGGGCC
TTCGCCCTCC CGGCCGGCCC CGGGCACGGC CCCGTCCTGG CGGCGGCGCG GTCCACCCTG
TACGGCGACG TCGCGGTGGC GGTGACGCTG GAGACCGCGC AGGCCTTCGC GGATTGGTCG
CGCGACCGCG CCCGCATCGT CGCGGTGACA TGCCTCATCG AGGCGCTGCT CCTCGCGGCG
GCCGCGGCTC TGCTGGCGGG GTGGCGCGTC TACCACGAGC TTCAGGCGGC GCGCGACCGC
GCTCACAGGA TGCTGGAGAA CGCCATCGAG GCCATGGCGG ACGGCTTCGT GATGTGGGAC
CGCGACGACC GCTTCGTCAC CTGCAACAGC CGCTACCGCG CGCTCTACGC CCTCAGCGAA
CCGGCACTGC GGCCCGGCGC GCGCTTCGAG GACATCATCC GGTACGGGGC GGAGCGCGGC
CAGTACCCGC AGGCCGGCAG CGACCTCGAC GCCTTCGTGC GCAACGTGGT GGCGTGGCAC
CGCGACGATC ACGGCACGCT CGAACGCCTG CTGCCCGGCG GCCGCTGGGT GCTGATCACC
GAGCGCCGCA CGGCGACCGG GGAGACCGTC GGCATTCGCA CCGACATCAC CGCCCTCAAG
GCCGCCCTGG AGGATCTCGC GGCGGCGAAT GCCCGGGCGG GGCAGGCCAT GGCCGAGGTC
CAGGCGCAGA ACACGGCCCT CCTGGAGCGC GACCGCTCCC TGCGCACCCA GAACCGGCTG
TTCGACGCCG CCCTCGGCAA CATGTCGCAC GGGCTCCTGA TGGCGGACGC GGCAGGCCGC
CTGATCGTGG CGAACCGCCG CCTCGCCGAA CTCCTCGGGA CCGCGCCCGA GACCCTGGCG
CCGGGCGAGA GCATGGAGGT GATCTTCGCC GAGATCGGGG CCCGCTGCTC CCTGGGCCGG
CGCGCCCTCG CCCGGATGCG CGCGCTGCAG CGCGACATCG CGACCCGCGA GGGTGCCGGC
ACCTTCAAGA TCTCGGGTCA GGACGGGCGC ACCCTCTCGA TCACCCAGCG GCCGATGGCC
GATGGCGGCT CGGTGGCGAT CTACGAGGAC GTCACCGAGC AGCAGCAGGC CGAGGACCGC
ATCCGCTTCC TCGCCCAGCA CGATCCGCTG ACGCGTTTGC CGAACCGCGT CCTGTTCCGC
GAGCGCCTGG ACGCGATGAT GCGCGCCGAC GCGCCGGACG CGACCGCGCT GCTCTACCTC
GACCTCGACG CCTTCAAGAA CGTGAACGAC ACGCTCGGCC ATCCGGTCGG CGACGCGCTG
CTGGCAGCGG TGGGGGCGCG GCTCGGCGCC TGCGTGGGCG AGGGCGGGGT CGTCGCGCGC
CTCGGGGGCG ACGAATTCGC GGTCGCCTGC GCGGAGGGCG AGGCCGCCGC GCAGGCGCTG
GCGACGCGGA TCATCGCGCA GCTGAGCGCG CCCTACGCGC TCGCGGGCCG GACCGTGCAG
GTCGGGGCGA GCGTCGGCAT CGCGGTGTCC GGGCCGGAGG CGCGGGACGC CGACACGCTG
CTGCGCCACG CCGACATGGC CCTCTACGAG GCCAAGGGGC GGGGCCGGGG CTTGGCCTGC
GTGTTCGAGA AGTCGATCGC CGCGCGCCTG CACGAGCGGC TGGCCCTGCA ATCCGACCTC
GCCGAGGCGG TTCCGGGCGG CCAGCTCGTC CTCGCCTACC AGCCGGTCTT CGACCTCGCC
GGGGGGCGGG TCAGCGGCTT CGAGGCCCTG GTGCGCTGGA ACCACCCGGT GCGGGGCTTC
GTCAGCCCGG CGCAGTTCAT CCCGATCGCC GAGCAGACCG GGCAGATCGA GGCGATCGGC
GCCTTCGTGC TCGACCGGGC CTGCCGGGAT GCGGCCGCCC TGCCGCCCGG CATCCGCGTC
GCGGTCAACC TCTCGCCGGT GCAGCTGCGG GCGGAGGACA TCGTCGAGCG GATCGCGACC
GCCCTCGCCG AATCCGGGCT CGCTCCGGCC CGGCTCGAAC TGGAGATCAC CGAGACGGCG
CTGATGGAGG ACAGCGAGCG GATGGTGCAG CTCCTGGAGC GCATCCGCGC CCTCGGGGTA
CGGATCGTGC TCGACGATTT CGGCACCGGC TACTCCTCGC TGAGCTACCT GCGCACCTTC
CCGTTCCACA AGATCAAGAT CGACCAATCC TTCGTGCGCG AGATGACGAC GCGGGCGAAC
TCGCTCGCGA TCGTGAGCGC CATCGTGGGG CTCGCCGACG AACTCGGGAT GGCGACGACG
GCGGAGGGCA TCGAGACCGC CGACCACCTG GATTTCGTGC GCAAGGTCGG CTGCCGGGAG
GCGCAGGGCT ACTTCCTCGG CAAGCCGAAG CCGATCCTCT CCGCCTTCGA GGTCCTGCGC
GCGCCGCTGC CGCCCTGCCC GGGCGCCGTC CCCCTCGCCT CCTGA
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| Protein sequence | MSAEAARARL PRRLVLTVLG VVALVSGALL GGSVLLLQQT HETVRVAAER SVERTAQTLA
HTINRQFLQI DSALASLPVL LSTLAATPGA ISPERAGRLL RGLNVQSFAF RDLMLVRRDG
TLWTSARARS ARFPLDETIP DRSRGMMTLA GPTHNRRTGE WVLHLARTVT LPGEGELVAV
AEVPLSSVQG LLAEAGDAPG QRVTLERADG RLLASLPHDE LATGRILPQR ISARERDDRA
FALPAGPGHG PVLAAARSTL YGDVAVAVTL ETAQAFADWS RDRARIVAVT CLIEALLLAA
AAALLAGWRV YHELQAARDR AHRMLENAIE AMADGFVMWD RDDRFVTCNS RYRALYALSE
PALRPGARFE DIIRYGAERG QYPQAGSDLD AFVRNVVAWH RDDHGTLERL LPGGRWVLIT
ERRTATGETV GIRTDITALK AALEDLAAAN ARAGQAMAEV QAQNTALLER DRSLRTQNRL
FDAALGNMSH GLLMADAAGR LIVANRRLAE LLGTAPETLA PGESMEVIFA EIGARCSLGR
RALARMRALQ RDIATREGAG TFKISGQDGR TLSITQRPMA DGGSVAIYED VTEQQQAEDR
IRFLAQHDPL TRLPNRVLFR ERLDAMMRAD APDATALLYL DLDAFKNVND TLGHPVGDAL
LAAVGARLGA CVGEGGVVAR LGGDEFAVAC AEGEAAAQAL ATRIIAQLSA PYALAGRTVQ
VGASVGIAVS GPEARDADTL LRHADMALYE AKGRGRGLAC VFEKSIAARL HERLALQSDL
AEAVPGGQLV LAYQPVFDLA GGRVSGFEAL VRWNHPVRGF VSPAQFIPIA EQTGQIEAIG
AFVLDRACRD AAALPPGIRV AVNLSPVQLR AEDIVERIAT ALAESGLAPA RLELEITETA
LMEDSERMVQ LLERIRALGV RIVLDDFGTG YSSLSYLRTF PFHKIKIDQS FVREMTTRAN
SLAIVSAIVG LADELGMATT AEGIETADHL DFVRKVGCRE AQGYFLGKPK PILSAFEVLR
APLPPCPGAV PLAS
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