Gene M446_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1990 
Symbol 
ID6132931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2222905 
End bp2224209 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content74% 
IMG OID641642221 
Productmajor facilitator transporter 
Protein accessionYP_001768889 
Protein GI170740234 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.803027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TGCGCCCCTC CGCACGCGCC GCGGAGCCGA GCCCGTCGCG CCGGGCGCTG 
CGCGGCCTCG ACGCGCTGAA CTTCTTCCTC GCCGACGTGC GCGACGGCCT CGGGCCCTAC
CTCGCGATCT ACCTGCTGGC CGTGCGCGGC CCCGCCCAGG GCTGGAACGA GGCGACGATC
GGCCTCGTCA TGACGGTGGC GGGCGTCGCC GGCCTGGCGG CGCAGACGCC CGCGGGCGCG
CTCATCGACC GGACCCGGCG CAAGCCGGCC ATCGTCATCG CGGCGGCCCT CGCCGTGACG
GCGAGCTGCC TCGTCCTGCC CTGGATCTCC AACGTCTACC TCGTGGCCGG CACGCAGGCC
CTCGCCCACG TGGCCGGCGC GGTCTTCCCG CCGGCCCTCA CCGGCATCAC CCTCGGCCTC
GTCGGGCCGC GGCTCTTCGC GCGGCGGATC GGCCGCAACG AGGGCTTCAA CCACGCCGGC
AACGCGGTCT CGGCCCTCCT CGCGGCGGGC CTCGCCACCG TGTTCGGGCC GGCCATCGTG
TTCTGGCTGA TGGGCCTCCT CGCGGCGCTC AGCATCGGCG CGATGCTGGT GGTGCCGCGG
GCGGAGATCG ACGACGACCT CGCCCGGGGC CTTGACGGCC GCCAGCACGA TCCCTGCGAG
CAGCCCTCGG GCCTCGCGGT GCTGCTGCGC AACCGCCCCC TCCTGCTCTT CGCCGCGCTC
TGCGCCGCCT TCCACCTCGC CAACGCGGCG ATGCTGCCCT CGGTCGGCCA GCTGCTCACG
AAGGTGGTGG GCAAGGACTA CGCCACCTCG CTCATCGCGA TCTGCATCGT GGCGGCCCAA
TGCGTGATGG TGCCGATGGC GATTCTGGTC GGCGCCAAGG CCGACCGTTT CGGGCGCAAG
CCGATCTTCC TCGCCGCCTT CGGCATCCTG GCCCTGCGCG GCATTCTCTA CACGCTCTCG
GACGATCCCG TCTTCCTCGT GGCGGTGCAG TGCCTCGACG GGGTAGGGGC CGGGATCTAC
GGGGCCCTCT TCCCGATCGT GGTCGCCGAC CTGACCCGCG GCAGCGGCCG CTTCAACGTC
GCGCAGGGCG CGGTCGCCAC CGCGCAGGGC GTCGGCGCCT CCCTCAGCGC CGCCCTGGCG
GGACTCGTGA TCGTCTCGGC CGGCTACGCG GCGGCCTTCC TGGTCCTGGC CGGGATCGCG
GCCCTCGGCT TCGCCCTCTA CCTCTTCGCC ATGCCGGAGA CGCGCGGCCT CGCTCCGGGC
CATCCGTCCC CGGCCGCGGC CCCGCTCGCC GTCCCGGCAG AGTGA
 
Protein sequence
MSDLRPSARA AEPSPSRRAL RGLDALNFFL ADVRDGLGPY LAIYLLAVRG PAQGWNEATI 
GLVMTVAGVA GLAAQTPAGA LIDRTRRKPA IVIAAALAVT ASCLVLPWIS NVYLVAGTQA
LAHVAGAVFP PALTGITLGL VGPRLFARRI GRNEGFNHAG NAVSALLAAG LATVFGPAIV
FWLMGLLAAL SIGAMLVVPR AEIDDDLARG LDGRQHDPCE QPSGLAVLLR NRPLLLFAAL
CAAFHLANAA MLPSVGQLLT KVVGKDYATS LIAICIVAAQ CVMVPMAILV GAKADRFGRK
PIFLAAFGIL ALRGILYTLS DDPVFLVAVQ CLDGVGAGIY GALFPIVVAD LTRGSGRFNV
AQGAVATAQG VGASLSAALA GLVIVSAGYA AAFLVLAGIA ALGFALYLFA MPETRGLAPG
HPSPAAAPLA VPAE