| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1981 |
|---|
| Symbol | |
|---|
| ID | 6132583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 2210190 |
|---|
| End bp | 2211878 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641642212 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_001768880 |
|---|
| Protein GI | 170740225 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.307299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCC TCGACCCCCT CACCCTGGCG GTGATCCAGG CGGGATTGCA GCAGGTCTGC
AACGAGATGG ACATCGCCTT CTCGCGCTCG GCCTTCTCGC CGGTGATCGC GGAGGCCGAC
GACCGCTCGG ACGGCATCTA CGACCGCGAC ACCGGCGCGC TCATCGCCCA GGGCGAGTAC
GGGCTGCCGG TCTTCGTCGG CACGATGCAG CACTCGACCG GCGAGCTGAT CCGGCTGATC
CGCGAGGGCC GGGCCGGCGC CCCGGAGCCC GGCGACGTCT ACATCGTCAA CGACCCCTAC
CTGGGCGGCA CGCACCTGAT GGACGTGCGC TTCGTGCGCC CGGTCTTCGT CGAGGGCGAG
CTGTTCTGCT GGCTCCAGAA TACCGGCCAC TGGCCGGATA TCGGCGGCAT GGTGCCGGGC
GGCTTCTCGG CCCACGCCAC CGAGGTCGAG CAGGAGGGGC TGCGCCTGCC CCCGGTCAAG
CTGTTCAAGC GCGGCGCGAT GGATCCGGAG ATCTTCTCCA TCATCACCTC GAACATCCGC
GTCGCGGACC AGCGGATCGG CGACATCCGG GCCCAGGCCG CGTCCCTCGC GGTCGGCGAG
GCCCGGCTGC GGGAGCTCCT GGAGAAGGTC GGCCGCGCCA CCCTCGACGC GGCGATCCGC
GAGATCCGCA TCCGCTCGGC CGAGCGGATG CGGGCCGAGA TCCGCCGCAT CCCGGACGGC
ACCTACGCCA GCGAGGCCTT CGTCGATTCG GACGGGGTGG TGGACGCGCC TTTGCGCATC
GCCCTCACGC TGACCAAGCG GGACGACACC CTGCACTTCG ACTTCTCCGG CTCCTCGCCG
CCGTGCCGGG GGCCGATGAA CTCGGTCCTG GCGACCACCG TCTCGTCGGT CTACCTCGCG
GTGAAGCACG TCTTCCCGGA CGTGCCGATC AATGCCGGCA CCTTCGAGCC CCTGGTGATC
CGCCGGCCCG AGGGGACCTT CCTGGATGCC CGCTACCCGC GCCCGGTCTC GGGCTGCGCC
GCGGAGGTGA GCCAGCGCAT CGCGGAAGCC GTGTTCCTGG CCCTGGTCCA GGCGATCCCC
GACCGGGTGA CGGCGGCGCC GGCCGGCACC TCGGGCAATT TCGCCCTCGG CGGCTTCGAC
CCGCAGAAGC AATCCCCCTA CGTCATGTAC CAGATCACCG GCGGCGGCTA CGGCGGCAAT
GCCGCGCATG ACGGGCTGTC GAACGGCTGC TCGACCATCG GCATCTCGAA GACCGCGCCC
GTCGAGGTGA TGGAGCAGTA TTACCCGGTG CTGTTCCGCC GCTTCGCGCT GCGGGAGGGC
TCGGGCGGGG CCGGCGCGCA CAGGGGCGGC TTCGGCGTGC ATTACGAGGT CGAATTGCTG
CGCGGGGAGG CGCGGGCCTC CTTCGTGATG GATCACGGCC GCTTCGGCCC GCCCGGGGTG
CGCGGCGGCG GCGACGGGGC GCCGAACGTG GTGCGCATCC ACCGCGACGG GGAGACCTTC
ACGCCGGCCC ACCTGTCGAA GGACCAGAAC ATCGCCATCC GGGCCGGCGA CCGGGTCGAG
ATCATGACCC CCGGGGGAGG GGGCTACGGC GATCCGCGGG AGCGCGATCC GGCCCTGATC
GCGCGGGACG TGCGGCGCGG CTACTACACG GCCGAGGAGG CCGAGGCGCT GTGGGGGAGG
CGGGAATGA
|
|---|
| Protein sequence | MSALDPLTLA VIQAGLQQVC NEMDIAFSRS AFSPVIAEAD DRSDGIYDRD TGALIAQGEY
GLPVFVGTMQ HSTGELIRLI REGRAGAPEP GDVYIVNDPY LGGTHLMDVR FVRPVFVEGE
LFCWLQNTGH WPDIGGMVPG GFSAHATEVE QEGLRLPPVK LFKRGAMDPE IFSIITSNIR
VADQRIGDIR AQAASLAVGE ARLRELLEKV GRATLDAAIR EIRIRSAERM RAEIRRIPDG
TYASEAFVDS DGVVDAPLRI ALTLTKRDDT LHFDFSGSSP PCRGPMNSVL ATTVSSVYLA
VKHVFPDVPI NAGTFEPLVI RRPEGTFLDA RYPRPVSGCA AEVSQRIAEA VFLALVQAIP
DRVTAAPAGT SGNFALGGFD PQKQSPYVMY QITGGGYGGN AAHDGLSNGC STIGISKTAP
VEVMEQYYPV LFRRFALREG SGGAGAHRGG FGVHYEVELL RGEARASFVM DHGRFGPPGV
RGGGDGAPNV VRIHRDGETF TPAHLSKDQN IAIRAGDRVE IMTPGGGGYG DPRERDPALI
ARDVRRGYYT AEEAEALWGR RE
|
|---|
| |