Gene M446_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1976 
Symbol 
ID6132578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2203372 
End bp2204592 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID641642207 
Productextracellular ligand-binding receptor 
Protein accessionYP_001768875 
Protein GI170740220 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CCCCGCTCTC TCGCCGCGCC GTGGTCGGCG GGCTCGCCGC GGCCCCGTTC 
GGGCTGCGGG CCGCGCGGGC CGCCGAGGGC CCGATCCGCA TCGGCGAGCT CAATTCCTAC
GGGCGCATGG CGGCCTTCGC GGGTCCCTAC CGGAACGCGA TGCTGCTCGC GCAGGACGCG
ATCAACCGGG CCGGCGGCAT CAAGGCCCTC GGCGGACGCC CGATCGAGAT GGTCTTCCGG
GACGACGGCT CCACGCCGGG CGACGCCGTG CGGGTGGCCG AGGAGCTCCT CACCCGCGAG
AACGTCGCCT TCCTGTGCGG CACCTTCCTG TCGAACGTGG GCCTCGCGGT GGCGGATTTC
GCCAACCAGC GCAAGGTGAT GTTCCTGGCC ACCGAGCCCC TCACCGACGC GCTGACGATG
GGCGGGGGCA ACCGCTACAC CTTCCGGGTC CGGCCCAGCA CCTACATGCA GACGAAGATG
CTCGTCGAGG CCGTGAAGGG GCGGGGCGTC AAGCGCTGGG CGATCGTCGC CCCGAACTAC
GAGTACGGCC AATCGGCCGC GGCGAATTTC AAGCGGCTGA TGGGCGCGGC GGTGCCGGGC
TTCGAGGTCG TGGGCGAGCA ATATCCGGCC CTGGGCAAGA TCGACGCCGG CGCGACGGTC
GGGGCCCTGG CGCAGACGAG GGCGGACGGG CTGTTCAACG TGCTGTTCGC GGCCGACCTC
ACGGCCTTCG TGCGCGAGGG CAACACCCGC GGCCTGTTCG AGAAGCGGAC CGTGGCGAGC
CTGCTCACCG GCGAGCCCGA ATACATGATC CCGCTCGGCG ACGAGACGCC GGAGGGCTGG
ATCACCACGG GCTATCCGTG GGAGACCATC GCCACCCCCG GCCACCGGGA ATTCGTGGCC
GCCTACCGGG CCCGGTTCTC CGACACGCCG CGGCTCGGCT CGCTCCTCGG CTACGTCGTG
GTCCACATGA TCCGCGACCT CCTGGAGACG GCGAAGTCCA CCGACACGGA GGCGCTGATC
GCCGCCCTCG AGGGGCTGAC CTCCGAGACC ATCGCCGGGA AGGTCACGAT GCGCGCCCTC
GACCACCAAT CGACGCTCGG CGCCTGGATC GGCGAGACGG CCCTCGACGG GCGCAAGGGC
ACGATGCGCA ATGTCCGCTA CGCGGACGGG GCGGATTACC TGTTTCCCGA GGCGGAGGTG
AGGGCGGCCC GCAAGGCCTG A
 
Protein sequence
MSLPPLSRRA VVGGLAAAPF GLRAARAAEG PIRIGELNSY GRMAAFAGPY RNAMLLAQDA 
INRAGGIKAL GGRPIEMVFR DDGSTPGDAV RVAEELLTRE NVAFLCGTFL SNVGLAVADF
ANQRKVMFLA TEPLTDALTM GGGNRYTFRV RPSTYMQTKM LVEAVKGRGV KRWAIVAPNY
EYGQSAAANF KRLMGAAVPG FEVVGEQYPA LGKIDAGATV GALAQTRADG LFNVLFAADL
TAFVREGNTR GLFEKRTVAS LLTGEPEYMI PLGDETPEGW ITTGYPWETI ATPGHREFVA
AYRARFSDTP RLGSLLGYVV VHMIRDLLET AKSTDTEALI AALEGLTSET IAGKVTMRAL
DHQSTLGAWI GETALDGRKG TMRNVRYADG ADYLFPEAEV RAARKA