Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1976 |
Symbol | |
ID | 6132578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 2203372 |
End bp | 2204592 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641642207 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001768875 |
Protein GI | 170740220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.102141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTGC CCCCGCTCTC TCGCCGCGCC GTGGTCGGCG GGCTCGCCGC GGCCCCGTTC GGGCTGCGGG CCGCGCGGGC CGCCGAGGGC CCGATCCGCA TCGGCGAGCT CAATTCCTAC GGGCGCATGG CGGCCTTCGC GGGTCCCTAC CGGAACGCGA TGCTGCTCGC GCAGGACGCG ATCAACCGGG CCGGCGGCAT CAAGGCCCTC GGCGGACGCC CGATCGAGAT GGTCTTCCGG GACGACGGCT CCACGCCGGG CGACGCCGTG CGGGTGGCCG AGGAGCTCCT CACCCGCGAG AACGTCGCCT TCCTGTGCGG CACCTTCCTG TCGAACGTGG GCCTCGCGGT GGCGGATTTC GCCAACCAGC GCAAGGTGAT GTTCCTGGCC ACCGAGCCCC TCACCGACGC GCTGACGATG GGCGGGGGCA ACCGCTACAC CTTCCGGGTC CGGCCCAGCA CCTACATGCA GACGAAGATG CTCGTCGAGG CCGTGAAGGG GCGGGGCGTC AAGCGCTGGG CGATCGTCGC CCCGAACTAC GAGTACGGCC AATCGGCCGC GGCGAATTTC AAGCGGCTGA TGGGCGCGGC GGTGCCGGGC TTCGAGGTCG TGGGCGAGCA ATATCCGGCC CTGGGCAAGA TCGACGCCGG CGCGACGGTC GGGGCCCTGG CGCAGACGAG GGCGGACGGG CTGTTCAACG TGCTGTTCGC GGCCGACCTC ACGGCCTTCG TGCGCGAGGG CAACACCCGC GGCCTGTTCG AGAAGCGGAC CGTGGCGAGC CTGCTCACCG GCGAGCCCGA ATACATGATC CCGCTCGGCG ACGAGACGCC GGAGGGCTGG ATCACCACGG GCTATCCGTG GGAGACCATC GCCACCCCCG GCCACCGGGA ATTCGTGGCC GCCTACCGGG CCCGGTTCTC CGACACGCCG CGGCTCGGCT CGCTCCTCGG CTACGTCGTG GTCCACATGA TCCGCGACCT CCTGGAGACG GCGAAGTCCA CCGACACGGA GGCGCTGATC GCCGCCCTCG AGGGGCTGAC CTCCGAGACC ATCGCCGGGA AGGTCACGAT GCGCGCCCTC GACCACCAAT CGACGCTCGG CGCCTGGATC GGCGAGACGG CCCTCGACGG GCGCAAGGGC ACGATGCGCA ATGTCCGCTA CGCGGACGGG GCGGATTACC TGTTTCCCGA GGCGGAGGTG AGGGCGGCCC GCAAGGCCTG A
|
Protein sequence | MSLPPLSRRA VVGGLAAAPF GLRAARAAEG PIRIGELNSY GRMAAFAGPY RNAMLLAQDA INRAGGIKAL GGRPIEMVFR DDGSTPGDAV RVAEELLTRE NVAFLCGTFL SNVGLAVADF ANQRKVMFLA TEPLTDALTM GGGNRYTFRV RPSTYMQTKM LVEAVKGRGV KRWAIVAPNY EYGQSAAANF KRLMGAAVPG FEVVGEQYPA LGKIDAGATV GALAQTRADG LFNVLFAADL TAFVREGNTR GLFEKRTVAS LLTGEPEYMI PLGDETPEGW ITTGYPWETI ATPGHREFVA AYRARFSDTP RLGSLLGYVV VHMIRDLLET AKSTDTEALI AALEGLTSET IAGKVTMRAL DHQSTLGAWI GETALDGRKG TMRNVRYADG ADYLFPEAEV RAARKA
|
| |