Gene M446_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1962 
Symbol 
ID6130948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2189223 
End bp2190506 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content72% 
IMG OID641642193 
Productmajor facilitator transporter 
Protein accessionYP_001768861 
Protein GI170740206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0235717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CAACGACCGG CGCCGTCGGC GCCGTCCCGG CCGCGGGCCG GGGCACCTGG 
ATCTCCGAAC TCGGGACCAA GGAGAAGCGG GCGCTCGGCG CCTGCGTGGG CGGCTGGGCG
CTCGACGCCA TGGACGTCCA GCTCTACAGC TTCGTCATCC CGACGCTGAT CGCCACCTGG
GGCGTGACCC GGGCCGAGGC CGGGGCGCTC GGCACCGCCG CCCTGCTGAC CTCCGCCATC
GGCGGCTGGC TCGCGGGCTT CCTGGCGGAT CGCTGGGGGC GGGTGCACAC CCTGCAGATC
GCCATCCTGT GGTTCGCCGG CTTCACCTTC CTGTCGGGCC TCGCGCAGAG CTTCGAGCAG
CTCTTCGCGG CCCGCGCGCT GATGGGCCTC GGCTTCGGCG GCGAGTGGGC GGCGGGCGCG
GTGCTGCTCG GCGAGACGAT CCGGCCCGAG CATCGCGGCA AGGCGCTGGG CACCATGCAG
TCGGGCTGGG CGCTCGGCTG GGGCGCGGCT GCGCTGCTCT ACACCCTGTT CTTCTCGCTG
ATGCCGCCCG AGACGGCGTG GCGCGCCCTG TTCTTCGTCG GCATCGCCCC GGCGCTCCTC
GTCTTCGTGC TGCGCCGCTA CGTCGAGGAG CCGGACGTCT ACCGGGAATC GCAGGCGAAG
ATCGCCGAGA CCGGCGACAA GCCGTCCTTC TTCGAGATCT TCCGGCCGCC GCTCCTGCGC
ATCACGGTCC TGGGCGCCCT GATGGGCACC GGGGCCCAGG GCGGCTACTT CGCGGTCACG
ACCTGGCTGC CGACCTTCCT GCGCACCGAG CGGGGCCTGT CGGTGCTGAA TTCCGGCGGC
TACCTCGCGG TGCTGATCGT CGGCTCCTTC TGCGGCTACC TGTCGGGGGC CTACCTCGCC
GACCGGATCG GCCGGCGCGC CACCTTCCTG GTCTTCGCCA TCGGGGCGGG GGTCATCGTG
ACGACCTACA CGATGGTGCC CTTCGGCAAT GCCGCCATGC TGGTGCTGGG CTTCCCCCTC
GGCTTCTTCG CCTCGGGCGT GTTCAGCGCC ATGGGCGCCT TCTTCACCGA GCAGTTCCCG
ACGCGGGTGC GCGGTGTCGG CCAGGGCTTC GCCTACAATT TCGGCCGGGC GATCGGGGCG
ATCTTCCCGA CCCTGGTCGG GCTGCTCTCG GCCTCGATGC CGCTCGGGCA GGCGATCGGC
CTGTTCGCGG CCGCCGCCTA CGCCACCATG GCGGTCGCGG CCTTCCTCCT GCCCGAGACC
AAGGGCAAGG CCCTCACCGC CTGA
 
Protein sequence
MSEATTGAVG AVPAAGRGTW ISELGTKEKR ALGACVGGWA LDAMDVQLYS FVIPTLIATW 
GVTRAEAGAL GTAALLTSAI GGWLAGFLAD RWGRVHTLQI AILWFAGFTF LSGLAQSFEQ
LFAARALMGL GFGGEWAAGA VLLGETIRPE HRGKALGTMQ SGWALGWGAA ALLYTLFFSL
MPPETAWRAL FFVGIAPALL VFVLRRYVEE PDVYRESQAK IAETGDKPSF FEIFRPPLLR
ITVLGALMGT GAQGGYFAVT TWLPTFLRTE RGLSVLNSGG YLAVLIVGSF CGYLSGAYLA
DRIGRRATFL VFAIGAGVIV TTYTMVPFGN AAMLVLGFPL GFFASGVFSA MGAFFTEQFP
TRVRGVGQGF AYNFGRAIGA IFPTLVGLLS ASMPLGQAIG LFAAAAYATM AVAAFLLPET
KGKALTA