Gene M446_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1923 
Symbol 
ID6134514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2148255 
End bp2149496 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID641642159 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001768827 
Protein GI170740172 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACAC ACGATTCCGC CCCCTCCAGC GGCCCCCTGA CGGGCCTGCG CATCCTCGAA 
CTCGGCCATT TCGTCGCCGC CCCGTTCGGG TCGCGGCTGC TCGCCGACCT CGGGGCTGAC
GTGATCAAGG TCGAGGCGCC CGGCGGAGAC CCGGTGCGCC AGTGGGGACG GCAGGTCGAG
GGCGCGGGCG CGCCCTGGAC CTCGATGCAC CAGCGCAACA AGCGCAGCCT CGTGCTGAAC
CTCAAGGATC CGCGCGCGGT CGAGGTCGTG CTGCGCCTCG TGCGTACCTG CGACGCGGTG
ATCGAGAACT TCCGCCCCGG CCAGCTCGCC AAGATGGGCC TTGGCCGCGA GGCGATGGAG
GCCGCGCGGC CCGGCATCGT GGTCGCCAGC ATCTCCGGCT ACGGGCAGGA CGGGCTCTAC
CGCGACCGCG CCGCCTTCGG GGTGATCGGC GAGGCGATCG GGGGCCTGCG CTACCTCACC
AACCACCCGC CCTCCGTCTC GGACCTGCCG CCCGTGCGCG TCGGCGTCTC GATCGGCGAT
TCGATCGCCG GGCTCTACGC GGCCTTCGGC ATCGTGGCGG CCCTGTGGGC GCGCGACCGG
AAGGAGGGCG GGGACGGGCG CGGCCGTGCC ATCGACGTGG CGCTGACCGA ATCCGTGCTC
TCGATGATGG AGGGCATGCT GCCCGAATAC GGCGTATTCG GCTCGGTGCG GCATCCGACG
GGTGCGCGCA TCGCCACCGC CTCCCCCTCC TCCGCCTACC CGACCGCGGA CGGCAAGTGG
ATTCTGATCG CCGGCAATTC CGAGCCGATC TTCGCCCGCC TGACCGCCCT GATGGGGCAG
CCCGAACTGG CGCAGGATCC GCGCTTCATC GGCAACGGCA AGCGCGTGGC GAACGTCGAG
GACCTCGACC GGATGATCGG CGCTTGGAGC GCCACGCATT CCGCTGCCGA CCTGGAGCGG
ATGCTGGCCG AGGCCGACGT GCCCTCGACC ATCGCCTACA CCGCCGCCGA GATTGCCGCC
GACCCGCAGT TCCGCGCCCG CGGCATGGTG CAGGAGGTCG AGGACCCGCA ATTCGGCACG
GTGCTGCACG CGGGCATCGT GCCGCACGTG CCCGACGATC CGGGCCGCAT CCGCTGGCCC
GGCCCCCGCG CGGGGGAGCA CACCGACGCG ATCCTGCGCG ATGTGGCCGG GCTCGACGCC
GACGCGATCG GGAAGCTGCG CGAGGACGGA GTGGCGGCAT GA
 
Protein sequence
MPTHDSAPSS GPLTGLRILE LGHFVAAPFG SRLLADLGAD VIKVEAPGGD PVRQWGRQVE 
GAGAPWTSMH QRNKRSLVLN LKDPRAVEVV LRLVRTCDAV IENFRPGQLA KMGLGREAME
AARPGIVVAS ISGYGQDGLY RDRAAFGVIG EAIGGLRYLT NHPPSVSDLP PVRVGVSIGD
SIAGLYAAFG IVAALWARDR KEGGDGRGRA IDVALTESVL SMMEGMLPEY GVFGSVRHPT
GARIATASPS SAYPTADGKW ILIAGNSEPI FARLTALMGQ PELAQDPRFI GNGKRVANVE
DLDRMIGAWS ATHSAADLER MLAEADVPST IAYTAAEIAA DPQFRARGMV QEVEDPQFGT
VLHAGIVPHV PDDPGRIRWP GPRAGEHTDA ILRDVAGLDA DAIGKLREDG VAA