Gene M446_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1922 
Symbol 
ID6134513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2147332 
End bp2148258 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content74% 
IMG OID641642158 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_001768826 
Protein GI170740171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACG ACGTGGTGGA GATCGTCGAG GTCGGGCCGC GCGACGGCTA CCAGGGCATC 
GGCCCCTTCA TCCCGACAGA GCGCAAGATC GAGATCCTCG GACGCCTCGT CGCCGCGGGT
CTCCGGCGCA TAGAGATCGG TTCCTTCGTG AGCGCGACGG CGCTGCCGCA GATGCGCGAC
ACGCCGGAGG TGCTCGCCGC CTGCGCGCGC TTCCCCGGCC TCGAACCCCA GGTGCTGGTG
CCGAGCGAGC GGCGCGGGCG CGACGCGGTA GCGGCCGGCG CGCGCCGCCT CGTCTTCGTG
CTCTCGGTGT CCGAGGCGCA CAACCGCAAC AACGTCCGGC GCTCGCCCGG GGAATCGGCT
GACGAGTACG ACCGCCTGCT GCGAGCGATC CCCGGCGAGG TCGCGATCCG CCTCGACCTC
GCGACCGCCT TCGACTGTCC CTTCGAGGGC CGCGTCCCGG AGGAGAAGGC GCTGGCGCTG
CTCGACCGCT TGGTCGCGCT CAAGCCCGAC GCCGAGATCT GCCTGTGCGA CACGACGGGA
CGCGCCGACC CGGCGCATGT CGGGCGGCTG TTCGCGCGGG CCAAAGCTCG CTTCCCCCAG
GCGAAGGCCT GGGCGCTGCA CGCGCACGAC ACCTACGGGC TCGGGCTCGC CAACGTGCAC
GCGGCCTACC GCGAGGACGT GCGGGTCTTC GACGCCTCCT TCGCGGGCCT CGGCGGCTGC
CCCTTCGCGC CCGGCGCCAC CGGCAACGTT GCGACCGAGG ACCTCGCCTG GATGTTCGCC
CGGATGGGCG TCGGGACCGG GATCGACCTC GACGCGCTCG TCGCGGTGGC ACGCGAGGGA
GCGGCACTGC CGGGCGGCCT CGCCGGCGGG CGGGTGCGCG ACGCCTACGG CGCCGGCACG
GCCTGCCTCG CGCAGGCTGT CACCTGA
 
Protein sequence
MTHDVVEIVE VGPRDGYQGI GPFIPTERKI EILGRLVAAG LRRIEIGSFV SATALPQMRD 
TPEVLAACAR FPGLEPQVLV PSERRGRDAV AAGARRLVFV LSVSEAHNRN NVRRSPGESA
DEYDRLLRAI PGEVAIRLDL ATAFDCPFEG RVPEEKALAL LDRLVALKPD AEICLCDTTG
RADPAHVGRL FARAKARFPQ AKAWALHAHD TYGLGLANVH AAYREDVRVF DASFAGLGGC
PFAPGATGNV ATEDLAWMFA RMGVGTGIDL DALVAVAREG AALPGGLAGG RVRDAYGAGT
ACLAQAVT