Gene M446_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1853 
Symbol 
ID6135078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2081621 
End bp2082337 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content72% 
IMG OID641642101 
ProductLrgB family protein 
Protein accessionYP_001768770 
Protein GI170740115 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.591971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG ATTTCGCCCT CTGGGTCTTC CTCGCCCATT CCCCGCTGCT CTGGCTCACC 
GTCACCCTGG TCGCCTACGT GGTGGCGGAC CGGGTCTCGC TCGCGACGAA CCGCCATCCC
CTCGCCAACC CGGTGCTGCA CGCGATCTGG ATGATCGGGC TCGTGCTCTT CGCCACCGGC
ACGCCCTACC CGGTCTACTT CGAGGGGGCG CAGTTCGTGC ACTTCCTGCT CGGGCCCGCC
ACCGTCGCCC TCGCCATCCC GCTCTACGAG CACCGGGCGA CGGTGCTGCG GGCGCTGGGG
CCGATGCTGG CGGCCCTGGC GATCGGCTCC CTCGTCGCCG TCTCCACCGC CCTCGCCATC
GCCCGGCTGC TCAAGGTGCC GGACGACGTG CTGCTGTCGC TCGCCCCCAA ATCCGTCACC
GCGAGCGTCG CCATGGGCAT CACCCAGGCC CTCGGCGGCG ACCCGACCCT CACGGCCGTG
CTCGTCATCC TCACGGGCAT CATCGGGGCG GTGCTGGTCA CGCCCGTGTT CGACCGGCTC
GGCCTCACCG ATTGGCGCGC GCGCGGCTTC GCGGCGGGGC TCGCCGCCCA CGGCATCGGC
ACCGCCCGGG CCTTCCAGGT CAGCGATGTC GCCGGCACCT TCGCGGGGAT CGCCATGGGG
CTCAACGCCC TGCTCACCGC CGTGATCGTG CCGATGGCGC TCTCGCTGAT GCAATGA
 
Protein sequence
MSQDFALWVF LAHSPLLWLT VTLVAYVVAD RVSLATNRHP LANPVLHAIW MIGLVLFATG 
TPYPVYFEGA QFVHFLLGPA TVALAIPLYE HRATVLRALG PMLAALAIGS LVAVSTALAI
ARLLKVPDDV LLSLAPKSVT ASVAMGITQA LGGDPTLTAV LVILTGIIGA VLVTPVFDRL
GLTDWRARGF AAGLAAHGIG TARAFQVSDV AGTFAGIAMG LNALLTAVIV PMALSLMQ