| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1844 |
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| Symbol | |
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| ID | 6132729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | + |
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| Start bp | 2072260 |
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| End bp | 2074977 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641642093 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001768762 |
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| Protein GI | 170740107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000234438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG TGGCTCTCTC CTGGCTCAAG CGCGGCACGA CGGCCCTCTG CGCGGCCCTG
CGCTGGCGGC CGGTCTGGGT TCTGGCGGGT GCCGGGGCGC TGCTGGCCGT GCTGATCGCC
TCCGCCGCGC TGCTGCTCGT CCGCGACCTG CACGCGCGGG CGGTGGAGGA CGCCCAGCAG
AGCCTCGCCG GCCTGTCGAT CAGCCTCGGC GAGCAGGCCG ACCGGGCCCT GCAGGCAATC
GAGCTCGTGC AGCAGGGCAT CATCGAGGAG ATCCGCGCCA ACGACGTGGT CACCGAGGAG
GAGTACGTCG CGCAGGTCTC CTCGCGGGCG ATGCACGACC TGCTGCGCGC CCGGATCGCC
GCGCTGCCGC AGGTGAACGC CATCACGCTG ATCGACGAGA CCGGCAAGCT GCGCAACTTC
TCGCGCTACT GGCCGATCCC CGACGTCACC ATCTCCGACC GGGATTATTT CAAGGCCCTG
GTGGCGGACC CCGCTTTGCA GCGCTTCATC AGCAAGCCGG TGCAGAACCG GGGCGACGGC
GCCTGGACGA TCTACATCGC CCGCAAGGTC TCGGGCTCGG ACGGCCGCTT CCTCGGCCTC
GTCCTCGGGG CGGTCGAGCT GCAGTATTTC GAGCGCCTCT ACCGCCAGAC CGCCCCGGCC
CCCGACTACG TCCTGTCGAT GTTCCGCCAG GACGGCGTGC TGCTGGTGCG CCACCCGGCC
CGGGAGGGCA CGATCGGCCG CAGCTTCGGC AATGCCGGCG CGGCGCTGAT CGCGGCGCTG
GGCTCGCGCA GCGGCGTGAT CCGCAACGTG AGCCCGATCG ACGGCCAGGA CCGTCTCATC
GCCGTGCGCG GCCTCGCCAA TTACCCGGTG CTCCTCAGCA TCAGCCGCAC GGCCGAGGCC
TGCCTCGCGG CCTGGAGCCG GCAGGCCGGG GCGCTCGGGG CCGCGGCCCT GGGCCTCGAT
CTCGGCCTCC TCGGGCTCGT CGTCCTGGGC GCGCGGCAGA TCCGGGGCCG GGAGCGGCTG
GCCGAGGCCG AGGCGGCCCG CGCCGCCGCG GAGGAGCGCG CGCGCGGCGA GTGCGACCTG
CGCACCCAGT ACGCCCGCTT CGGCATCGCC CTCGACAGCA TGACCCAGGG CCTCTGCCTG
TTCGACAGGG ACGACCGGCT GATCCTGATG AACGCGCGCT TCGCCGCCAT GCACGGCGTG
CCGGCCGACC TCGCCCGGCC GGGGACGCCG CTCGCCGACC TCCTCGCCCG CCTCGCGGCG
CACGGCACCG AGGGCGCGCT GCGGCGCCGG CCCGAGGGGG CGGACGACCC GGTCGCCTTC
ACGGTCGACC TCGCCGATGG GCGGGCGATC AGCGTCGTGC AGGCGGCGAT CCCGGCCGGC
GGCTTCGTCT GCACCCACGA GGACGTGACC GAGCGGCGCC GCAGCGAGGA GCAGATCGCC
TATCTGGCGC GCCACGACGC GCTCACCGGC CTGCCCAACC GCATTCCCCT GCGGGAATGG
ATGGAGGAGG TCTTCGCGAG GCGGCCCTAC GGGGATGTCG GGGCGGTGCT CTGCCTCGAC
CTCGACGGGT TCAAGGTCGT CAACGACAGC CTCGGCCACC CGGCCGGGGA CGAGCTCCTG
CGCCTCGTCG CCCGGCGGCT GCGGGGGGTG GTGAGCGCGA CCGACCGCGT GGCGCGGCTC
GGCGGCGACG AATTCGCCAT CGTGCAGGTG GGGGCCGAGC AGCCCCGGCA GGCCGCCCTG
CTCGCCGAGC GCGTCGTCGC GGTCCTGCAG CAGCCCTTCG AGATCCAGGG CCAGCAGGTG
GTGATCGGCG CCAGCCTCGG CGTCGCCACC GCGCTCAGCG CCGACCCCAC CCCCGACGCG
CTCCTGCGCA GCGCCGACAT CGCCCTCTAC CAGGCCAAGG CCGCCGGCCG GGGCACGTGG
CGGTTCTTCG ACGCGGAGAT GGACCTCGAG ATCCAGCGCC GCCGCCGCCT CGCCGCCGAC
CTGCGCCGCG CCCTCGACGA GGGGCAGTTC GAGGTGCACT ACCAGCCGCT CGTCGAGGCG
CGCAGCCGCG CGCTGCGCGG CTTCGAGGCG CTGCTGCGCT GGCGCCACCC GGAGCACGGC
AGCGTCAGCC CCGCCGTGTT CATCCCGCTC GCGGAGGAGA CCGGCCTGAT CCGGCCCCTC
GGCGCCTGGG TGCTCGCCCA GGCCTGCGCC GAGGCCGCGA GCTGGCCCGA ACCCCTCAAG
ATCGCCGTCA ACCTCTCGCC CGTGCAGTTC GTGCAGGGCG ACCTCGTCGC GGAGGTGCGG
CGGGTCCTGG CCGAGACCGG CCTCGGCCCG GGCCGGCTCG AACTGGAGAT CACCGAATCC
GTGCTCCTGC AGGACAACGA GGTCACGCTC GCCGTGCTGC ACGAGCTGCG GACGCTCGGC
GCCCTGATCT CGATGGACGA TTTCGGCACC GGCTACTCGA GCCTGAGCTA CCTGCGCAGC
TTCCCCTTCG ACAAGATCAA GATCGACCAA TCCTTCGTGC GCAACCTCGC CCGCGAGACC
GACAGCGTCG AGATCGTACG GGCCGTGATC GGGCTCGGCC GCGCCCTCGG CATGGGCGTG
CTGGCGGAAG GCGTGGAGAC CACCGAGCAG CTCGACATCC TGCGCCAGGA GGGCTGCGAC
GAGCTGCAGG GCTACCTGTT CAGCCGGCCC CGGCCGGTCA CCGAGATCCG CAGCCTCTTC
AACGCGAAGG CGGCCTGA
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| Protein sequence | MDRVALSWLK RGTTALCAAL RWRPVWVLAG AGALLAVLIA SAALLLVRDL HARAVEDAQQ
SLAGLSISLG EQADRALQAI ELVQQGIIEE IRANDVVTEE EYVAQVSSRA MHDLLRARIA
ALPQVNAITL IDETGKLRNF SRYWPIPDVT ISDRDYFKAL VADPALQRFI SKPVQNRGDG
AWTIYIARKV SGSDGRFLGL VLGAVELQYF ERLYRQTAPA PDYVLSMFRQ DGVLLVRHPA
REGTIGRSFG NAGAALIAAL GSRSGVIRNV SPIDGQDRLI AVRGLANYPV LLSISRTAEA
CLAAWSRQAG ALGAAALGLD LGLLGLVVLG ARQIRGRERL AEAEAARAAA EERARGECDL
RTQYARFGIA LDSMTQGLCL FDRDDRLILM NARFAAMHGV PADLARPGTP LADLLARLAA
HGTEGALRRR PEGADDPVAF TVDLADGRAI SVVQAAIPAG GFVCTHEDVT ERRRSEEQIA
YLARHDALTG LPNRIPLREW MEEVFARRPY GDVGAVLCLD LDGFKVVNDS LGHPAGDELL
RLVARRLRGV VSATDRVARL GGDEFAIVQV GAEQPRQAAL LAERVVAVLQ QPFEIQGQQV
VIGASLGVAT ALSADPTPDA LLRSADIALY QAKAAGRGTW RFFDAEMDLE IQRRRRLAAD
LRRALDEGQF EVHYQPLVEA RSRALRGFEA LLRWRHPEHG SVSPAVFIPL AEETGLIRPL
GAWVLAQACA EAASWPEPLK IAVNLSPVQF VQGDLVAEVR RVLAETGLGP GRLELEITES
VLLQDNEVTL AVLHELRTLG ALISMDDFGT GYSSLSYLRS FPFDKIKIDQ SFVRNLARET
DSVEIVRAVI GLGRALGMGV LAEGVETTEQ LDILRQEGCD ELQGYLFSRP RPVTEIRSLF
NAKAA
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