Gene M446_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1839 
Symbol 
ID6132501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp2066433 
End bp2067125 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID641642088 
ProductGntR family transcriptional regulator 
Protein accessionYP_001768757 
Protein GI170740102 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.128914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCG ACAAGAATTT CGCGGTTAAA CCGATCGTCA CGAATTCGAG CCTGCGCACC 
CTGGCGTACG AGGCGCTGAA ATCGGCGATC ACCAACATGG ACATCTATAA CAGCGGCGAG 
GAGATCCGGC TCGACGAGCG CAAGCTGTCG CAGGATCTCG GGGTGAGCCG CACGCCGGTG 
CGCGAGGCCC TCACGGTGCT GGAGCAGGAG GGCTTCGTCC GCTCGGAGCC CCGCCGCGGC 
GTCTTCATCG TCAGGAAGAC GAAGAAGGAG ATCATCGGGA TGATCCACGC CTGGGCGGGC 
CTGGAGAGCA TGGCGGCGCG GCTCGCCTGC TCCCGCGCCT CGGACGCGGA TCTGCGGTCG 
CTGCGGACCG GCTTCCCGGA ATTCTTCCAG GACGCGCCGG CCGAGCACCT CGCCGAGTAT 
TCCGACGCCA ATATCCGCTT CCACCAGACC ATCATCTCGC TCGGCCGCTG CGAGGTGATC 
GAGAGCCTCG CCAGCAACCT CCTCATCCAC GTGCGGGCGG TGCGCAACAT CGCCCTGACG 
CAGGGCGACC GCGCCAAGAC CTCGATCCAG GACCACCTGC GCATCATCGA GGCGCTGGAG 
GCGCGCGACG CCGCCCTGGC CGAGCGCCTC GTGCGCGACC ACGCCCTCGG CCTCGCCGAG 
CACGTCGACC GCTACGGCGA CTTCCTCGAC TGA
 
Protein sequence
MASDKNFAVK PIVTNSSLRT LAYEALKSAI TNMDIYNSGE EIRLDERKLS QDLGVSRTPV 
REALTVLEQE GFVRSEPRRG VFIVRKTKKE IIGMIHAWAG LESMAARLAC SRASDADLRS 
LRTGFPEFFQ DAPAEHLAEY SDANIRFHQT IISLGRCEVI ESLASNLLIH VRAVRNIALT 
QGDRAKTSIQ DHLRIIEALE ARDAALAERL VRDHALGLAE HVDRYGDFLD