Gene M446_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1830 
Symbol 
ID6133018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2056448 
End bp2059945 
Gene Length3498 bp 
Protein Length1165 aa 
Translation table11 
GC content76% 
IMG OID641642079 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001768748 
Protein GI170740093 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCG AGACGCGGCC GAAGGAGGTC ATCGGGATCG CCGGAGGCGG CGCGCTCGGC 
GCGCTCGTCC GCGCCCACGA CTGGGCGGCC ACTCCCCTCG GGCCGATCGG GTCCTGGCCC
GGCAGCCTGC GCACCGCCGT CGGCATCTTG CTGCTCTCCC CCGTGCCGAT GGTGCTGCTC
TGGGGCGAGG ACGGCGTCAT GATCTACAAC GACGCCTACG CGGTGCTCGC CGCCGGCCGC
CACCCGGCCC TGCTCGGCAG CCGGGTGCGG GAGGGGTGGC CGGAGGTCGC GGCCTTCAAC
GACCACGTCA TGCGGGTGGT GCTCGCGGGC GGGACGCTCG CCTACAAGGA CCAGGAACTC
GTCCTCCACC GCAGCGGCCG GCCCGAGCGG GTCTGGATGA ACCTCGACTA TTCCCCGGTG
CCCGACGAGG GCTGCCGTCC CGCCGGGGTG CTGGCGGTGG TGGTCGAGAC CACGGCCCGC
GTCCTGGCCG AGCGCCGGCT CGTCGCCGAG GCGAAGCGGC AGCGCCGGAT CCTGGAGCAG
GCGCCGCGCT TCATCTGCAT CCTGCGCGGC CCCGACCACG TGATCGAGTT CGCCAACGCC
GCCTTCCGCG CGCTGTTCGG CGCGCGGGAG GTCCTCGGCC GCAGCCTGCG CGCGGCCGTC
CCGGACCTCG CCGGGCCGGG CGTCTTGGAG CGCCTCGACC AGGTCCGCGC CACGGGCGAG
CGCCGCGCCG CCCGGGCCGC GCGCGTGCGC CTGCGGCCCG GGCCGGAGGG GCCCGCGCGC
GATCTGCGCC TCGATCTCGT CTACGCGCCG GTGACGGACG AGGAGGGCCG GGTGGTCGGC
GTGCTCTGCG AGGGCACCGA CGTCACCGAG CGCCACCGGG CCCAGGTCGC CCTGAGGCGG
CGCTCCCGTC AGCTGCAGCA GCTCGCCGAG GCGGCCCTCG GGGTGGCGCG GGCGCCGACC
CTCGCCGCCA CCCTCGACGC GATCACCCGG GCGGCGCGCC GGATCATCGG CGCCCGCCAG
GCGGTGACGA GCCTCACGGG CGGGGAGGAG CGGAGCCGGG CGGTGAGCGC GCTCTCCCCG
GACCGGCGCT GCGCCGCCCG GGGCCGCGAC CTGCCGGCCC CTGACGGGAC CGGCATCGAC
GCGATGGTCT GCGAGCAGAA CCGCCCGGCG CGGATGTCCC AGGCGGAGCT CGAAGCCCAT
CCGCGCCGGC GCGGCGTCGG CGCCCAGGCC TGCGCCCCTC CGCCGATGCG CGGCTGGCTC
GCCGCGCCGC TCATCGGCCG CGACGGGCGC AACCTCGGCC TGATCCAGCT CTCCGACCGG
GTGGACGGCG GCGAGTTCGA CGCCACCGAC GAGGCGATGC TGGTCCAGCT CGCCCAGATC
GCCTCCGCCT CGGTGGAGCG GATGCTGGCC GAGGCGGCCC TGCGCCGCAG CGAGGCGGCG
CTCGGCGAGA CCGTCTCGAC CCTGGACGCG CTCCTCGCCC ACGCCCCGAT CGGCTTCGCC
TTCTTCGATC CGCAGCACCG CTACGTGCGC CTCAACGCGG TCCTGGCCGA GATCAACGGC
CTCCCCGTCG CGGCCCATCT CGGGCGCAGC ATCGAGGAGG TGCTGCCGGT GAACGCGGTC
ACGGTCGGGC CCGCCCTCGA CGAGGTCGTC GCCACCGGCC GCTCCCTCGA CACGCTGGAG
GTCGACGGGG AGACGCCGGC CCGGCCCGGG GAGCTCCGCT CCTGGCTCAC CAGCTTCTTC
CCGGTCTTCG GCCCGGACGG GGCGGTGGCC TATGTGGGCG TCACGGTGAT CGACATCACC
GAGCGGCGGC GCGCCGAGGC CGCCGTGCGG GACCTCGCCG AGAGCCTGGA GCGGCGCGTC
CAGGAGCGCA CCGCCGCCCT GGCCGAGAGC GAGCGCCGCT TCCGCGCCAT CTTCGACACC
ACCTTCCAGC TCACCGGTCT CGCCGCCCTC GACGGCACCA TCCTGGTGGT GAACCGCGCG
GCCCTGGAGG CGGCGGGTGT CGCGCTGGCC GAGGTCGTCG GCGTGAAGAT GTGGGACTCG
CCCTGGTGGC GGGACCTGCC CGAGGAGGCC GCGCGGCTGC GGGAGGGCAT CGCCCGCGTC
GCGCGCGGCG CCTTCGTGCG CTACGAATCC CGCCATCGCC TGCCGATCGG CCTGCGCAGC
TTCGACTTCT CGATGAAGCC CGTCCTCGAC GAGGCGGGCC GACCGATCTT CCTGGTGGCC
GAGGGCCGCG ACGTCACCGA CCAGCGCCGG GCCGAGGAGG CGCTGCGCCA GGCGCAGAAG
ATGGAGGCGG TGGGCCAGCT CACCGGCGGC CTCGCCCACG ACTTCAACAA CCTGCTCACC
GGCATCTCCG GCTCGCTCGA ATTGCTGCAG TCGCGCCTGG CGCAGGGGCG GGTGTCGGAG
ACCGGCCGCT ACATCGACGC GGCGCAGGGG GCGGCCAAGC GGGCGGCGGC GCTGACCCAC
CGCCTCCTCG CCTTCTCGCG CCGCCAGACC CTCGACCCCA GGCCCATCGA CGTCAACCTC
CTGATCGCCG GCATGGAGGA GCTGATCCGG CGCACCATCG GCCCGGCGGT CAGCCTGTCG
GTGGAGCCCG ACCCCGCCCC CTGGACCATC CTGGTCGACC CGGGCCAGCT CGAGAACGCG
CTGCTCAACC TGTGCATCAA TGCCCGGGAC GCGATGCCGG AGGGCGGGCG CATCGTCATC
GCGACCGCCA AGCGCGAGCT CGGCCCGGGC GCGGGCGACC TGCCGCCCGG CGCCTACGCG
ACGCTCACGG TGACGGATAC GGGCGCCGGC ATGAGCCCGG AGGTGCTGGC GCGGGCCTTC
GACCCGTTCT TCACCACGAA GCCCCTCGGC CAGGGCACCG GCCTCGGCCT GTCGATGATC
TACGGCTTCG TGCGCCAGTC GGGCGGCCAG GTGCGCATCG ACTCGGCGCA GGGGCGGGGC
ACCGCGGTCG CCCTCCTGTT TCCCCGCCAT CACGGGCCGG CGCGGGCGCC CGAGGAGGTT
CCGGACCGCG CGGCGCCGCC GCGGGCCCGG GACGGGGAGA CGGTGCTCGT CGTCGACGAC
GAGGCGAGCG TGCGCCTGCT CGTCGCCGAA GTGCTGCAGG ATCTCGGCTA CCGGGCGCTC
GAGGCGAGGG ACGGGGCGGC CGGGCTCGCG CAGCTCCGGG CGGAGGGCCG GATCGACCTC
CTCGTCACCG ATGTGGGCCT GCCGGGCGGC ATGAACGGCC GCCAGCTCGC CGATGCCGGC
CGGGTGCTGC GGCCGGACCT GAAGGTCCTG TTCATCACCG GCTACGCGGA GACGACGGTG
GTCGGCGCGG GCGACCTGCA ACCCGGCATG GAGGTGCTCA CCAAGCCCTT CGTGCTGGAG
GAGCTGGCGC GGCGCATCCG CGGGATGATC GCAGGCGCCC CCGGCGCGGG ACCGGGGGCG
CCCGCCGCGC TCAGCCCGCC GGCTGCGCCA GGAAGCGGAA CATGTGGCGG CGCGCCTCCT
CGTCCATCTC GGCCTTGA
 
Protein sequence
MTVETRPKEV IGIAGGGALG ALVRAHDWAA TPLGPIGSWP GSLRTAVGIL LLSPVPMVLL 
WGEDGVMIYN DAYAVLAAGR HPALLGSRVR EGWPEVAAFN DHVMRVVLAG GTLAYKDQEL
VLHRSGRPER VWMNLDYSPV PDEGCRPAGV LAVVVETTAR VLAERRLVAE AKRQRRILEQ
APRFICILRG PDHVIEFANA AFRALFGARE VLGRSLRAAV PDLAGPGVLE RLDQVRATGE
RRAARAARVR LRPGPEGPAR DLRLDLVYAP VTDEEGRVVG VLCEGTDVTE RHRAQVALRR
RSRQLQQLAE AALGVARAPT LAATLDAITR AARRIIGARQ AVTSLTGGEE RSRAVSALSP
DRRCAARGRD LPAPDGTGID AMVCEQNRPA RMSQAELEAH PRRRGVGAQA CAPPPMRGWL
AAPLIGRDGR NLGLIQLSDR VDGGEFDATD EAMLVQLAQI ASASVERMLA EAALRRSEAA
LGETVSTLDA LLAHAPIGFA FFDPQHRYVR LNAVLAEING LPVAAHLGRS IEEVLPVNAV
TVGPALDEVV ATGRSLDTLE VDGETPARPG ELRSWLTSFF PVFGPDGAVA YVGVTVIDIT
ERRRAEAAVR DLAESLERRV QERTAALAES ERRFRAIFDT TFQLTGLAAL DGTILVVNRA
ALEAAGVALA EVVGVKMWDS PWWRDLPEEA ARLREGIARV ARGAFVRYES RHRLPIGLRS
FDFSMKPVLD EAGRPIFLVA EGRDVTDQRR AEEALRQAQK MEAVGQLTGG LAHDFNNLLT
GISGSLELLQ SRLAQGRVSE TGRYIDAAQG AAKRAAALTH RLLAFSRRQT LDPRPIDVNL
LIAGMEELIR RTIGPAVSLS VEPDPAPWTI LVDPGQLENA LLNLCINARD AMPEGGRIVI
ATAKRELGPG AGDLPPGAYA TLTVTDTGAG MSPEVLARAF DPFFTTKPLG QGTGLGLSMI
YGFVRQSGGQ VRIDSAQGRG TAVALLFPRH HGPARAPEEV PDRAAPPRAR DGETVLVVDD
EASVRLLVAE VLQDLGYRAL EARDGAAGLA QLRAEGRIDL LVTDVGLPGG MNGRQLADAG
RVLRPDLKVL FITGYAETTV VGAGDLQPGM EVLTKPFVLE ELARRIRGMI AGAPGAGPGA
PAALSPPAAP GSGTCGGAPP RPSRP