Gene M446_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1827 
Symbol 
ID6133015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2052394 
End bp2054103 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content74% 
IMG OID641642076 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001768745 
Protein GI170740090 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.161362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGG GTGCGCATCG CGTCGAGAAC ACCCTCCGGG GCCCGACCGA TCCGGAGCCC 
GCTTCCCCGC TGCCGCGGGC GCTGCTCCTG CGCTGCCTCG ACGGCCTGCG CCACGGGCTG
CTGATCCTGG ACGAGGCGGG GCGCGTCGCG CTCTGCACCG AGCCGGCCCG GGCGCTGCTC
GCCGCGCTCG CGCCGGACCT CACCGAGCCG CTCTCTCCGC GGCGCCTGAT CGCGGCCCTG
CGCGGGGCGG GCGCCCTCGC CAGGGCCGAC ATCCTGCGGG CGGCGCGGCG CCTGCGCGAG
GAGGGCGCCG TCTCCCTCGA CCTCTGCCAC CGCGACCGCA CCGTGCAGGT CTCCCTGAGC
CGCGTCCCCG GCACCGGAAT GGTCGCCACC CTGGAGGATA TCAGCGCGCG GCGCGCCGCC
GAGGCGAGCG CGGCCGAGAC GGCGCGGCTC GATCCCCTGA CCCGGCTCCC CAACCGCCTG
CTCCTGCGCG AGCGCCTCGG CGCGGCCCTC GACCGGCTCG CGCGGCGCGG CGAGGGCTGC
GCGCTCCTGC TCGTCGACCT CGACCGTTTC AAGCCGGTCA ACGACACGCT CGGCCACCCG
GTCGGCGACG CGCTGCTCGA GAAGGTCGCC GACCGGCTGC GCGCGACGGT GCGGGCCGAG
GACACGGTGG CCCGCATCGG CGGGGACGAG TTCGTGGTCC TGCAATCGGC CGTGCGGGAC
GCCGCCGACA CCACCGCGCT CGCCCAGCGC CTCGTCGACC TGATCGGCCG GGCCTACATG
ATCGAGGGCC ACCTCGTCAG CATCGGGGCG AGCCTCGGCA TCGCGCTCGC CCCGCAGGAC
GGGACCGATC CCGACCGCCT CCTCAAGAGC GCCGACCTCG CCCTCTACCG CGCCAAGCGC
GACGGGCGCG CCACCTTCCG GTTCTTCGAG CCGACCATGG ACGCGCAGAT GCAGGCGCGC
CGCCAGCTCG AGCTCGACAT GCGCCAAGCG CTCGCCCGGC GCGAATTCGA GATCCACTAC
CAGCCCCAGC TCAACCTGCT GGAGGAGCGC CTCACCGGCT GCGAGGCGCT GCTGCGCTGG
CGCCACCCCG TCCGCGGCAT GGTCTCGCCC GCCGAGTTCA TCCCGCTGGC CGAGGAGATC
GGCCTGATCG TGCCGATCGG CGACTGGGTG ATCCGCCAAG CCTGCCACGA CGCCGTGCGC
TGGCCCCGGC CGATCACGGT CGCGGTCAAC GTCTCGCCCG CGCAGTTCAA GGGCGACCGC
CTCGTCGACA CCGTAGTCTC GGCCCTGGCG CGCTCGGGGC TGCCCGCCCC GCGCCTGGAG
ATCGAGATCA CCGAGGGGCT TCTCCTGCAG GACGACGCCC AGACCCTGCG CACCCTGCAC
CGCCTGCGCG ACCTCGGCGT GCGCGTCTCG ATGGACGATT TCGGCACCGG CTACTCCTCG
CTGAGCTACC TGCGCGCCTT CCCGTTCGAC AAGATCAAGA TCGACCGCTC CTTCGTCCGC
GACATGGCCC AGAAGCCCGA CGGCGACGCG ATCATCCGGG CGATCGCCGG GCTCGGGCGC
AGCCTCGGCA TGACCACCGT GGCGGAGGGC GTCGAGACGC CCGAGCAGAT GCGCCGCATC
CGGGCGGAGG GCTGCACCGA CGTGCAGGGC TACCTCGTGA GCCGCCCGAT CCCCGCCGAC
GACCTCCTGG CCCTGCTCGC CCGCTCCTGA
 
Protein sequence
MALGAHRVEN TLRGPTDPEP ASPLPRALLL RCLDGLRHGL LILDEAGRVA LCTEPARALL 
AALAPDLTEP LSPRRLIAAL RGAGALARAD ILRAARRLRE EGAVSLDLCH RDRTVQVSLS
RVPGTGMVAT LEDISARRAA EASAAETARL DPLTRLPNRL LLRERLGAAL DRLARRGEGC
ALLLVDLDRF KPVNDTLGHP VGDALLEKVA DRLRATVRAE DTVARIGGDE FVVLQSAVRD
AADTTALAQR LVDLIGRAYM IEGHLVSIGA SLGIALAPQD GTDPDRLLKS ADLALYRAKR
DGRATFRFFE PTMDAQMQAR RQLELDMRQA LARREFEIHY QPQLNLLEER LTGCEALLRW
RHPVRGMVSP AEFIPLAEEI GLIVPIGDWV IRQACHDAVR WPRPITVAVN VSPAQFKGDR
LVDTVVSALA RSGLPAPRLE IEITEGLLLQ DDAQTLRTLH RLRDLGVRVS MDDFGTGYSS
LSYLRAFPFD KIKIDRSFVR DMAQKPDGDA IIRAIAGLGR SLGMTTVAEG VETPEQMRRI
RAEGCTDVQG YLVSRPIPAD DLLALLARS