| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1798 |
|---|
| Symbol | |
|---|
| ID | 6129963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2014778 |
|---|
| End bp | 2015986 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641642049 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001768718 |
|---|
| Protein GI | 170740063 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.637603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0827017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCGTCA CCGCCCTCGC GGCGGCGCTC GCCTGCGCGA CGATCCTCGC CGGCCCGGCC
CGGGCCGCGG ACCCCATCAA GATCGGCGTG TCCGGGCCCT TCACGGGCGG ATCCTCGTCG
ATGGGCGTGT CGATGCGCGA CGGCGTGCGG CTCGCGGTGC AGGAGATCAA CCAGAAGGGC
GGCGTGCTCG GCCGCCAGCT CCAGATCGTC GAGCGCGACG ACGAGGCCAA GAACGAGGTC
GGGGCCCAGG TCGCCCAGGA ACTGATCAAC AAGGAGAAGG TCGTCGCCAC GCTCGGCTTC
ATCAACACCG GCGTGGCGCT CGCGGCCCAG CGCTTCTACC AGGAAGCCGA GATCCCGGTG
ATCAACAACG TGGCGACCGG CACGATCATC ACCAACCAGT TCAACCCGCC GGATTACGAC
GCCAATTACG TGTTCCGGAC CTCGGCCTAC GACGTGCTGC AGGCCGGCAT GATGGCCGAC
GAGGCGATCA CCCGCGGCTT CAAGAAGATC GCGATCCTGG CCGATTCCAC CAATTACGGC
CAGCTCGGGC GCGAGGATCT GGAGAAATAT CTCAAGACCA AGGGCGTGAC CCCGGTCACC
GTAGAGAAAT TCAACATCAA GGACGTCGAC ATGACGCCCC AGCTGCTGAA GTCGCAGGCG
GCGGGCGCGG ACGTGATCCT GGCCTACGGG ATCGGGCCGG AACTCGGCCA GATCGCCAAC
GGCATGGCCA AGCTCGGCTG GAAGGTGCCG ATGATCACCT CGTGGCCGTC CTCGATGCAG
AGCTTCATCG ACATCGCCGG GCCGAACGGC AACGGCGTGA CCATGCCCCA GACCTTCATC
GAGGATAAGA CCCTGCCCCG GCGCAAGGCC TTCCTCGAGG GCTACTACGC CACCTACAAG
GTCTCCAAGA TCCCGACCCC GGTGGCGGGC GCGCAGGGCT ACGATTCGGT CTACCTGCTG
GCCGCGGCGA TCAAGCAGGC CGGCGGCACC GACGGGCCGA AGATCCGCGC GGCGCTGGAG
GACCTGAAGG AGAAGGTCGA GGGCGTGGTG ACGACCTACG ACCACCCCTT CACCAAGACC
GACCACAACG CCATCACCCG CAACATGGTC GTGTTCGGCA AGGTGCAGGA CGGCCGCATC
GTCTACGCCA AGGACGAGGA CGCCAAGAAC GCGGGCGTCG TGCGCATGAA GGAGAAGGCG
TCGAACTAG
|
|---|
| Protein sequence | MPVTALAAAL ACATILAGPA RAADPIKIGV SGPFTGGSSS MGVSMRDGVR LAVQEINQKG
GVLGRQLQIV ERDDEAKNEV GAQVAQELIN KEKVVATLGF INTGVALAAQ RFYQEAEIPV
INNVATGTII TNQFNPPDYD ANYVFRTSAY DVLQAGMMAD EAITRGFKKI AILADSTNYG
QLGREDLEKY LKTKGVTPVT VEKFNIKDVD MTPQLLKSQA AGADVILAYG IGPELGQIAN
GMAKLGWKVP MITSWPSSMQ SFIDIAGPNG NGVTMPQTFI EDKTLPRRKA FLEGYYATYK
VSKIPTPVAG AQGYDSVYLL AAAIKQAGGT DGPKIRAALE DLKEKVEGVV TTYDHPFTKT
DHNAITRNMV VFGKVQDGRI VYAKDEDAKN AGVVRMKEKA SN
|
|---|
| |