Gene M446_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1790 
Symbol 
ID6134391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2003642 
End bp2004895 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID641642041 
ProductLeu/Ile/Val-binding family protein 
Protein accessionYP_001768710 
Protein GI170740055 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.322977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0207356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCC TGACCCGGGC GCTCGCCCGC ACCACCGCGC TCGGCCTCGC GCTCCTCGCC 
GCCCAAGGGC TCGTCGCCGG CCCGGGCGCC CTCGCCCAGC AGGCCGACCC GGGCCGGATC
TCGGACGGCG TCGTCAAGAT CGGCATCCTC AACGACCAGT CGGGCGTCTA CGCCGATTTC
GGCGGGCGCG GCTCGGTCGA GGCGGCCAGG ATGGCGGTCG AGGATTTCGG CGGCAGCGTG
CTCGGCGCGC CGGTCCAGAT CGTCGACGCG GACCACCAGA ACAAGCCCGA CATCGCCTCC
AACGTCGCCC GCCAGTGGTA CGACACCGAC AAGGTCGACG CGATCATGGA GCTGACCACC
TCCTCGGTGG CCCTCGCCGT GCAGGGGCTC TCGCGCGAGA AGAAGCGGAT CACCATCGTG
GACGGGGCCG CGACGACGGA CCTCACCGGC AAGCAATGCA CGCCCTACGG GTTCCATTGG
GCCTACGACA CGCACGCCCT GGCGGTCGGC ACCGGCGGCT CCCTGGTCGA GAATGGCGGC
GACACCTGGT TCTTCATCAC CGCCGACTAC GCCTTCGGCA CGGCGCTGCA GGCCGACACG
ACGAAGTTCG TCGAGGCCAA GGGCGGCAAG GTGCTCGGCA GCGTGCGCCA TCCCCTGAGC
GCGCAGGACT TCTCCTCCTT CCTGCTCCAG GCCCAGGGCT CGGGCGCCAA GGTCATCGGC
CTCGCCAATG CAGGGCTCGA CACCTCGAAC TCGATCAAGC AGGCGGCGGA GTTCGGCATC
GTCCAGGGCG GCCAGCGCCT CGCGGCCCTG CTCTTCACCC TGGCGGAGGT GCACGGCATC
GGGCTCAAGG CCGCCCAGGG CATCGTGCTC ACCGAGGGCT ACTACTGGGA CCTCGACGAT
CAGGCCCGGG GCTTCGCCAA GCGCTACATG GCCCGGTTCG GGCGGATGCC GAGCATGATC
CAGGCCGGCA CCTACTCGTC GGTCACCCAC TACCTGAAGG CCGTGAAGGC GGCCGGCACG
GACGAGACCG AGGCGGTCGC CCGCAAGATG CGCGAATTGC CGGTCGACGA CTTCTTCGGC
CGCGGCGGCA AGGTGCAGGC GAACGGCCGC ATGGTCCACG ACATGTACCT GTTCCAGGTG
AAGACGCCGG CCGAGTCGAA GGCGCCCTGG GACTATTACA AGCTCCTGGC CACGATCCCC
GGCGAGAAGG CGTTCCTGTC GCCCAAGGAC AGCGGCTGCC CGCTGACGCA GTGA
 
Protein sequence
MRTLTRALAR TTALGLALLA AQGLVAGPGA LAQQADPGRI SDGVVKIGIL NDQSGVYADF 
GGRGSVEAAR MAVEDFGGSV LGAPVQIVDA DHQNKPDIAS NVARQWYDTD KVDAIMELTT
SSVALAVQGL SREKKRITIV DGAATTDLTG KQCTPYGFHW AYDTHALAVG TGGSLVENGG
DTWFFITADY AFGTALQADT TKFVEAKGGK VLGSVRHPLS AQDFSSFLLQ AQGSGAKVIG
LANAGLDTSN SIKQAAEFGI VQGGQRLAAL LFTLAEVHGI GLKAAQGIVL TEGYYWDLDD
QARGFAKRYM ARFGRMPSMI QAGTYSSVTH YLKAVKAAGT DETEAVARKM RELPVDDFFG
RGGKVQANGR MVHDMYLFQV KTPAESKAPW DYYKLLATIP GEKAFLSPKD SGCPLTQ