Gene M446_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1744 
Symbol 
ID6131862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1959844 
End bp1960515 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID641642000 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001768669 
Protein GI170740014 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG AATTCGAGTT CGGCGAGGTC TTCGCCTCCT GGCCGGAGCT CGCCTGGGGC 
GCCCTCCACA CCCTCGTCCT GTCGGGGCTC GCGATGGTGA TCGGCATGGC GGTGGCGGTG
CTCGGGGCAC TCGGCCGCAC CTCCGGGCCG GCCTGGCTGA GCGGGCTGAT CGGCGCCTAC
ATCGAGGTCA TCCGCAACAC GCCGTTCCTG ATCCAGATCT TCGTGATCTT CTTCGGCCTG
CCCTCGCTCG GCCTGCGGCT CGACCCGGAC AGCGCCGCGC TCCTCGCCCT CGTGGTCAAT
GTCGGGGCCT ACGGCATCGA GATCATCCGG GCCGGGATCG AGAGCATCGA CCACGGCCAG
ATCGAGGCCG GCCGCACGCT CGGCCTGCGG CCGCTGCAGA TCTTCCGCTA CGTGGTGCTG
AAGCCGGCCA TCCAGGCGAT CTACCCGTCG CTGACCAGCC AGTTCATCCT CCTGATGCTG
AATTCGAGCG TCTGCTCGGC GATCGCCGCG AGCGAGCTGA CCGCGGCGGC GGGCGACATC
CAGTCCCGCA ACTTCCGCAG CTTCGAGGTC TACCTCGTGG TGACGGGGAT CTATTTCGCG
CTCTCGGTGG TGCTGTGGGG CCTGTTCGCC GGGATCGAGC GGGCCTTCCT GCGCAAGCCG
AGCGCGCGGT AG
 
Protein sequence
MSYEFEFGEV FASWPELAWG ALHTLVLSGL AMVIGMAVAV LGALGRTSGP AWLSGLIGAY 
IEVIRNTPFL IQIFVIFFGL PSLGLRLDPD SAALLALVVN VGAYGIEIIR AGIESIDHGQ
IEAGRTLGLR PLQIFRYVVL KPAIQAIYPS LTSQFILLML NSSVCSAIAA SELTAAAGDI
QSRNFRSFEV YLVVTGIYFA LSVVLWGLFA GIERAFLRKP SAR