Gene M446_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1742 
Symbol 
ID6131860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1958334 
End bp1959155 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID641641998 
Productextracellular solute-binding protein 
Protein accessionYP_001768667 
Protein GI170740012 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CCCATCGGCC GAGCCGCCGC GCCGCCCTCG CGCTCGCCGC CGGCCTCGCC 
CTCGCGCTGG CGCCGGGGCT CCGCCCGGCG GAGGCGGCGA CGCCCGACGA GATCAAGGCG
CGCGGCAAGC TCGTGGTCGG GGTCCTCACC GACTACCCCC CCTTCGGCGG CACCGATGCC
GACCAGAAGC CGGCGGGCTA CGACGTCGAC GTGGCGCGGC TCTTCGCCAA GTCGCTCGGG
GTGGAGCTCG ACCTCGTGCC GGTGACGGGG CCGAACCGCA TCCCCTACCT CCTCACCAAC
AAGGTCGACA TGCTGATCGC GACCTTCGGC ATCACGGCCG AGCGGTCGAA GCAGGTGCTG
TTCTCCAACC CCTACAGCAC GCTCAGCACC TACGTGCTCG GGCCGAAATC GCTGGCGGTG
TCGAAGCCGG AGGACCTCAA GGGCGTGACG ATCGGGGTCG CCCGGGCCAG CACCCAGGAC
ACCGCGGTCT CGGCCGTCGC CCCGCCCGGC ACCCGCATCA TGCGCTTCGA CGACGACGCC
ACCACCACGC AGGCGATCAT CTCCGGGCAG GTGCAGTCGA TCGGCGCCAG CAACACCGTG
CTGGCCCAGC TGACCAAGGA TTACGCGAGC CTCGGCATCG AGCCGAAGTT CAACCTGCGC
GAGCAGGCGA ACGGCATGGC CTTCCGCAAG GCCGATACGG CCCTGCGCGA CCGCGCTAAC
GCCTTCATCG CGGAGATCGC CGGCAACGGC GAATTGTCGG CGATCAACCA GCGCTGGTTC
GGGCGCCCGC TCGGCACCCT GCCGCCGATG CCGCAATTCT GA
 
Protein sequence
MTASHRPSRR AALALAAGLA LALAPGLRPA EAATPDEIKA RGKLVVGVLT DYPPFGGTDA 
DQKPAGYDVD VARLFAKSLG VELDLVPVTG PNRIPYLLTN KVDMLIATFG ITAERSKQVL
FSNPYSTLST YVLGPKSLAV SKPEDLKGVT IGVARASTQD TAVSAVAPPG TRIMRFDDDA
TTTQAIISGQ VQSIGASNTV LAQLTKDYAS LGIEPKFNLR EQANGMAFRK ADTALRDRAN
AFIAEIAGNG ELSAINQRWF GRPLGTLPPM PQF