Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1733 |
Symbol | |
ID | 6130355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 1948569 |
End bp | 1949927 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641641989 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_001768658 |
Protein GI | 170740003 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGC CCCTGCCGGA CGGGCCCCTC GTCGCCTTCT ACGGCGACGA CCTCACCGGC TCCTCGGCCG CCATGGAGGT TCTGGCCTTC GCGGGGCTGG AGACGGTGCT GTTCCTGGCC CCGCCCGCCC CGGAGCGCCT CGCCGCCGTC TCCTCCGCCC GGGCGGTGGG CATCGCCGGC ATGGCCCGGG CGGCGGCGCC GGCCTGGATG GACGAGCACC TGCCGCCGGT CTTCCGGCTC CTGGCCTCGC TCGGCGCGCC GGTCCTGCAC TACAAGGTCT GCTCCACCTT CGATTCCGCC CCGCATGTCG GCTCGATCGG CCGCGCGGCC GAGATCGGCG CGCGGCTCCT CGCCCCGGCC TGGATCCCGA TGGTCGTGGC CGATCCCGGC ATGGGCCGCT ACCAGTGCTT CGGCAACCTC TTCGCCATGG CGGGCGAGGA CGGGCACCGC CTCGACCGCC ACCCGACCAT GGCGCGCCAC CCGGTCACGC CCATGGACGA GGCGGATCTC GGCCGCCACC TCGCCCGCCA GACCGCGCTG CCGGTCGGCC TCGTCGACTT CGCGGCGACG AAGCGGGGGG AGGGGGGCGC GGCCCTCGCC CGGGCGCGGG CGGCGGGCGC CCGCATCGTC TCCCTCGACG TGCTCGACCC CGAGACGCTC GCCGCGGCCG GGCGCCTGAT CTGGGAGGAG GGCGGCCGGC CGGTCTTCGG CATCGGCTCG CAGGGCTTCG AGGCGGCCCT GGTCGCCCAT TGGCGGCGGG CCGGGCTGCT GCCGCCCGCG GCGCCCGCGC CGCGCCCGGG CGCGGTCGCG CGGATCGCCG CCGTCTCGGG CTCGGTCTCG CCGGTCACCC AGGGGCAGAT CGCCTTCGCC CGCGCGCAGG GTTTCCGCGT GATCCCCCTC GACGCGGCCC GGGCCGTCGA TCCGGCGGCC TTCGCGCGCG AGGTCGGGCG GGCGGCCGAG GCGGCCCTCG CGGCCCTCGG GGAGGGGAGC GACCCGCTCG TCACCACGGC CGAGGGCCCG GACGATCCCG CGGTGGCGCG CCTGCGCGAG GCCGTGCGCG CGGCGGGCGC CGCCCAGGAG GCGGTCGACG CGCGCCTCGG CGCCGGGCTC GGGGCGATCC TGAACCGGGT CCTGCGCGAG GGGCGGCTCG GCCGCGGGGT GATCGCCGGG GGCGACACGT CCGGGCGGGC CGCCGCGCAA CTCGGCATCG ACGCGCTCGC GGCGATCGCG CCGCTCGCGC CCGGCGCGCC GCTCTGCCGG GCCCTGGGCC CCGAGGGCGC GCCGGCGGGG CTCGAACTCG CCCTCAAGGG CGGCCAGGTC GGCCGCCCCG ATTTCTTCGT GGCCGCCAAG GGTGGCTGA
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Protein sequence | MSAPLPDGPL VAFYGDDLTG SSAAMEVLAF AGLETVLFLA PPAPERLAAV SSARAVGIAG MARAAAPAWM DEHLPPVFRL LASLGAPVLH YKVCSTFDSA PHVGSIGRAA EIGARLLAPA WIPMVVADPG MGRYQCFGNL FAMAGEDGHR LDRHPTMARH PVTPMDEADL GRHLARQTAL PVGLVDFAAT KRGEGGAALA RARAAGARIV SLDVLDPETL AAAGRLIWEE GGRPVFGIGS QGFEAALVAH WRRAGLLPPA APAPRPGAVA RIAAVSGSVS PVTQGQIAFA RAQGFRVIPL DAARAVDPAA FAREVGRAAE AALAALGEGS DPLVTTAEGP DDPAVARLRE AVRAAGAAQE AVDARLGAGL GAILNRVLRE GRLGRGVIAG GDTSGRAAAQ LGIDALAAIA PLAPGAPLCR ALGPEGAPAG LELALKGGQV GRPDFFVAAK GG
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