Gene M446_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1733 
Symbol 
ID6130355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1948569 
End bp1949927 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content79% 
IMG OID641641989 
Producttype III effector Hrp-dependent outers 
Protein accessionYP_001768658 
Protein GI170740003 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC CCCTGCCGGA CGGGCCCCTC GTCGCCTTCT ACGGCGACGA CCTCACCGGC 
TCCTCGGCCG CCATGGAGGT TCTGGCCTTC GCGGGGCTGG AGACGGTGCT GTTCCTGGCC
CCGCCCGCCC CGGAGCGCCT CGCCGCCGTC TCCTCCGCCC GGGCGGTGGG CATCGCCGGC
ATGGCCCGGG CGGCGGCGCC GGCCTGGATG GACGAGCACC TGCCGCCGGT CTTCCGGCTC
CTGGCCTCGC TCGGCGCGCC GGTCCTGCAC TACAAGGTCT GCTCCACCTT CGATTCCGCC
CCGCATGTCG GCTCGATCGG CCGCGCGGCC GAGATCGGCG CGCGGCTCCT CGCCCCGGCC
TGGATCCCGA TGGTCGTGGC CGATCCCGGC ATGGGCCGCT ACCAGTGCTT CGGCAACCTC
TTCGCCATGG CGGGCGAGGA CGGGCACCGC CTCGACCGCC ACCCGACCAT GGCGCGCCAC
CCGGTCACGC CCATGGACGA GGCGGATCTC GGCCGCCACC TCGCCCGCCA GACCGCGCTG
CCGGTCGGCC TCGTCGACTT CGCGGCGACG AAGCGGGGGG AGGGGGGCGC GGCCCTCGCC
CGGGCGCGGG CGGCGGGCGC CCGCATCGTC TCCCTCGACG TGCTCGACCC CGAGACGCTC
GCCGCGGCCG GGCGCCTGAT CTGGGAGGAG GGCGGCCGGC CGGTCTTCGG CATCGGCTCG
CAGGGCTTCG AGGCGGCCCT GGTCGCCCAT TGGCGGCGGG CCGGGCTGCT GCCGCCCGCG
GCGCCCGCGC CGCGCCCGGG CGCGGTCGCG CGGATCGCCG CCGTCTCGGG CTCGGTCTCG
CCGGTCACCC AGGGGCAGAT CGCCTTCGCC CGCGCGCAGG GTTTCCGCGT GATCCCCCTC
GACGCGGCCC GGGCCGTCGA TCCGGCGGCC TTCGCGCGCG AGGTCGGGCG GGCGGCCGAG
GCGGCCCTCG CGGCCCTCGG GGAGGGGAGC GACCCGCTCG TCACCACGGC CGAGGGCCCG
GACGATCCCG CGGTGGCGCG CCTGCGCGAG GCCGTGCGCG CGGCGGGCGC CGCCCAGGAG
GCGGTCGACG CGCGCCTCGG CGCCGGGCTC GGGGCGATCC TGAACCGGGT CCTGCGCGAG
GGGCGGCTCG GCCGCGGGGT GATCGCCGGG GGCGACACGT CCGGGCGGGC CGCCGCGCAA
CTCGGCATCG ACGCGCTCGC GGCGATCGCG CCGCTCGCGC CCGGCGCGCC GCTCTGCCGG
GCCCTGGGCC CCGAGGGCGC GCCGGCGGGG CTCGAACTCG CCCTCAAGGG CGGCCAGGTC
GGCCGCCCCG ATTTCTTCGT GGCCGCCAAG GGTGGCTGA
 
Protein sequence
MSAPLPDGPL VAFYGDDLTG SSAAMEVLAF AGLETVLFLA PPAPERLAAV SSARAVGIAG 
MARAAAPAWM DEHLPPVFRL LASLGAPVLH YKVCSTFDSA PHVGSIGRAA EIGARLLAPA
WIPMVVADPG MGRYQCFGNL FAMAGEDGHR LDRHPTMARH PVTPMDEADL GRHLARQTAL
PVGLVDFAAT KRGEGGAALA RARAAGARIV SLDVLDPETL AAAGRLIWEE GGRPVFGIGS
QGFEAALVAH WRRAGLLPPA APAPRPGAVA RIAAVSGSVS PVTQGQIAFA RAQGFRVIPL
DAARAVDPAA FAREVGRAAE AALAALGEGS DPLVTTAEGP DDPAVARLRE AVRAAGAAQE
AVDARLGAGL GAILNRVLRE GRLGRGVIAG GDTSGRAAAQ LGIDALAAIA PLAPGAPLCR
ALGPEGAPAG LELALKGGQV GRPDFFVAAK GG