| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1731 |
|---|
| Symbol | |
|---|
| ID | 6130353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 1946507 |
|---|
| End bp | 1947295 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641641987 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001768656 |
|---|
| Protein GI | 170740001 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGC AGGACAAAGT CGCGATCGTC TTCGGGGCCG GCTCGGCCGG CCCGGGCTGG
GGCAACGGCA AGGCCGCGGC CGCCCTCTTC GCCCGCAACG GGGCCGAGGT GATCTGCGTC
GACATCAACC GGGCAGCCGC CGAGGAGACG GCCGGGATCA TCGCCGGCGA GGGCGGGCGG
GCGCGCCCCG CCGCCTGCGA CGTCACCGAT TCCGCCGCCG TGAAGGCCGT GGTGGACGAG
GTGGCCGCCC GCCACGGCCG CATCGACGTG CTGCACAACA ATGTCGGCCA CGCCACCATG
GGCGGGCCGG TCGAGCTCGA CGAGGCGGAC TGGCAGCGCG CCCTCGACCT CAACGTCACC
GGCTGCTTCC TCACCTGCAA GCACGTGCTG CCGCACATGC TGGCCCGGCG CGCGGGCGCC
ATCGTCAACG TCTCGTCGAT CGCGGCGATC CGCTACACCG GCTACCCCTA CGCCGCCTAC
TACGCCGCCA AGGCGGCCGT GAACAACTTC ACCATGGGGC TCGCCCTGCA ATACGCGCGG
GACGGCATCC GGGCGAACGC GATCATGCCC GGCCTGATGA ACACGCCGCT GATCTTCCAG
CAGATCTCCG GCCAGTACCG GGACGCCGAG GAGATGGTGC GGGCGCGCGA CGCCGCCTGC
CCGATGGGCC GCATGGGCAC GGCCTGGGAC GTGGCCAAGG CCGCCCTGTT CCTCGCCTCC
GACGACGCGG CCTACATCAC GGGCGTCAGC CTGCCGGTCG ATGGCGGCCT CTCCTGCCGG
GCCGGATGA
|
|---|
| Protein sequence | MRLQDKVAIV FGAGSAGPGW GNGKAAAALF ARNGAEVICV DINRAAAEET AGIIAGEGGR
ARPAACDVTD SAAVKAVVDE VAARHGRIDV LHNNVGHATM GGPVELDEAD WQRALDLNVT
GCFLTCKHVL PHMLARRAGA IVNVSSIAAI RYTGYPYAAY YAAKAAVNNF TMGLALQYAR
DGIRANAIMP GLMNTPLIFQ QISGQYRDAE EMVRARDAAC PMGRMGTAWD VAKAALFLAS
DDAAYITGVS LPVDGGLSCR AG
|
|---|
| |