Gene M446_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1707 
Symbol 
ID6132637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1921455 
End bp1922114 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID641641965 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001768634 
Protein GI170739979 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCT TCTCCCTCAA CCACCTCGTC TTCCTGCTGG AGGGCGTCGG CTGGACGGTC 
GTGCTGACGG CCCTCGCCTT CCTGCTGGGC AGCCTCGCGG GATTCGGGGT GATGCTCCTG
CGCATCGCCC GCGCCCGCTG GGTGCGCCGC CTCGCCTTCG CGTACGTGCA GGTGATCCAG
GGCCTGCCGC TGCTGATCCT GCTGTTCTGC GTCTATTTCG GGCTCGGCGT GATCGGGGTG
GAGCTGTCGC CCCTGGTCGC CGCGGCGATC TCGCTGATGG TCTATTGCAG CGCCTTCCTG
GGCGAGATCT GGCGGGGCTG CGTCGAGGCG GTGCCGCGCA CGCAGGGTGA GGCGGCCGAG
TGCCTCGCCC TGTCGCGCTG GCAGGCGCTC GTGGACGTGA TCCTGCCCCA GGCCGCCCGC
ATCGCGGTGC CGCCCACCGT CGGGTTCTTC GTGCAGGTGC TCAAGAGCAC CTCGCTCGCC
TCGGTGGTCG GCTTCGTCGA GCTGACCCGG GCGAGCCAGC TCATCAACAA CTCGATCTTC
CAGCCTTTCC TTGTCTTCGG GCTGGCGGGC GCCCTGTACT TCGCCCTCTG CTACCCGCTG
TCGCGCTGGA GCCGCAGGCT CGAAAGGAAA CTCCATGTCG GCCGTCGTCA GCCTGCGTGA
 
Protein sequence
MGGFSLNHLV FLLEGVGWTV VLTALAFLLG SLAGFGVMLL RIARARWVRR LAFAYVQVIQ 
GLPLLILLFC VYFGLGVIGV ELSPLVAAAI SLMVYCSAFL GEIWRGCVEA VPRTQGEAAE
CLALSRWQAL VDVILPQAAR IAVPPTVGFF VQVLKSTSLA SVVGFVELTR ASQLINNSIF
QPFLVFGLAG ALYFALCYPL SRWSRRLERK LHVGRRQPA