Gene M446_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1634 
Symbol 
ID6133277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1826843 
End bp1828225 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content70% 
IMG OID641641893 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001768562 
Protein GI170739907 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00700823 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGAGC GCTGGACCCC CTCGAGCTGG CGGCGGCTGC CGATCCAGCA GGTGCCCGAC 
TATCCCGATG CGGTGGCGCT GGAGGCGGTC GAACGTCAGC TCGCGAGCTT TCCGCCGCTG
GTTTTTGCAG GTGAGGCGCG CAAGCTGAAG CGCAGCCTCG CCACGGTGGC GGCGGGCGAG
GCCTTCCTGC TCCAGGGCGG CGACTGCGCC GAGAGCTTCG ACGAGCATTC GGCCGACAAC
ATCCGCGACT TCTTCCGCGT CTTCCTGCAG ATGGCGCTGG TGCTCACCTT CGCGGGCGGC
TCGCCGGTGG TGAAGGTCGG GCGCATCGCC GGCCAGTTCG CCAAGCCGCG CTCCTCGCCG
ACCGAGACGC AGGACGGCGT CGCCCTGCCG AGCTACCGCG GCGACATCGT CAACGGCATC
GGCTTCACCG CCGAGGACCG GATCCCGGAT CCGCGGCGGC AGGTCGAGGC CTACCGGCAA
TCGGCGGCGA CGCTGAACCT GCTGCGCGCC TTCGCGACCG GCGGCTACGC CAACCTGGAG
AACGCCCATC GCTGGATGCT GGGCTTCGTG AAGGACTCGC CGCAATCCTC GGCCTACGAG
GACCTCGCCC AGCGCATGAC CGAGACCCTC GACTTCATGC GGGCGATCGG CATCAACCCG
GAGACGCACC AGGAGGTGCG CCAGACCGAC TTCTACACGA GCCACGAGGC GCTGCTGCTC
GGCTACGAGC AGGCCCTGAC CCGGGTCGAT TCGACGAGCG GGGATTGGTA CGCCACGTCC
GGGCACATGC TCTGGATCGG GGACCGGACG CGGCAGGCGG ACCACGCCCA CATCGAGTAC
GCCCGGGGCA TCAAGAACCC GGTCGGGCTC AAATGCGGCC CGTCCCTGAA GCCCGACGAC
CTGATCCGGC TGATCGGCCT GCTCAATCCC GAGAACGAGC CGGGCCGCCT GACGCTGATC
TGCCGCTTCG GCGCCGACAA GGTGGGCGAC CACCTGCCGG GGCTGATCCG GGCGGTCGAG
CGCGAGGGCC GCAAGGTGGT GTGGTCGTGC GACCCCATGC ACGGCAACAC GGTCACGGCG
AGCGGCTTCA AGACCCGGCC CTTCGAGCGG GTGATGAAGG AGATCCAGGG CTTCTTCGAC
GTCCACCGGG CGGAGGGCAC CTACGCGGGC GGCATCCACC TGGAGATGAC CGGCAAGAAC
GTCACCGAGT GCACGGGCGG CGCGCGCGCG CTCACGGCGG ACGACCTGCG GGACCGCTAC
CACACCTATT GCGACCCGCG CCTCAACGCC GAGCAGGCGC TGGAGGTGGC GTTCCTGACC
GCCGACCTCG TCAAGCGCGA GCGGCGGGAC AAGGAGCGGC CCCGGATCGA GGCCGCCGAG
TAG
 
Protein sequence
MSERWTPSSW RRLPIQQVPD YPDAVALEAV ERQLASFPPL VFAGEARKLK RSLATVAAGE 
AFLLQGGDCA ESFDEHSADN IRDFFRVFLQ MALVLTFAGG SPVVKVGRIA GQFAKPRSSP
TETQDGVALP SYRGDIVNGI GFTAEDRIPD PRRQVEAYRQ SAATLNLLRA FATGGYANLE
NAHRWMLGFV KDSPQSSAYE DLAQRMTETL DFMRAIGINP ETHQEVRQTD FYTSHEALLL
GYEQALTRVD STSGDWYATS GHMLWIGDRT RQADHAHIEY ARGIKNPVGL KCGPSLKPDD
LIRLIGLLNP ENEPGRLTLI CRFGADKVGD HLPGLIRAVE REGRKVVWSC DPMHGNTVTA
SGFKTRPFER VMKEIQGFFD VHRAEGTYAG GIHLEMTGKN VTECTGGARA LTADDLRDRY
HTYCDPRLNA EQALEVAFLT ADLVKRERRD KERPRIEAAE