Gene M446_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1612 
Symbol 
ID6130104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand+ 
Start bp1801776 
End bp1802417 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content79% 
IMG OID641641875 
Productgeneral secretion pathway protein J 
Protein accessionYP_001768544 
Protein GI170739889 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.42682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAT CCTGCTCGCG GCCGCTGTCG CCCGAATCGC CGCCGGCTTC GCGGCCCGGG 
CCCGCCGCGG CGGGCTTCAC CCTGGTCGAG GCGCTGACGG CGCTCGCGGT CGCGGCGCTG 
ATCGCCGTGC TGCTGCTGCA GGCGGTCCGG GCGGCCGGGT TCCTGTCGCG GCTCGGGGCC 
GGCATCGCCG TGGAGGCGGA TCTCGACGTG GTCCGCGACC ACCTGCGCGC CGCCCTCGCC 
CGGCCCCGGG GCCGGGGCGC GGACGGCAGG GGGCCGTCCT TCCTGGGCGA GCCCGGACGT 
CTGGTGGCGA TCCTCGCGGC CAGCCCCGCG ACCGAGCGGG GCGCCGACAT GCGGATGGTG 
CTGGCCGGGA TGCCCCGGGC GGACGGCCGC ATCGACCTCG TCGAGAGCCG CGTCCCGGAG 
ACGGCGGCCG AGGCCGACCC GCCCGAGGTG CTGGTCGGCG GGGCGGCGGC GCTGCGCCTG 
CACTATTTCG GCGTCGCCCC GACCGAGATG CAGCCGCGCT GGCTCGACGC CTGGACGCGC 
CGCGACCGGA TGCCGGCGCT GGTCGAGATC GTCCTCGACT TCCCGCCCGG CGACCCGCGG 
CGCTGGGCGC CGCTCGTGGT CCCGCTGGAG CCGCTCCCAT GA
 
Protein sequence
MIGSCSRPLS PESPPASRPG PAAAGFTLVE ALTALAVAAL IAVLLLQAVR AAGFLSRLGA 
GIAVEADLDV VRDHLRAALA RPRGRGADGR GPSFLGEPGR LVAILAASPA TERGADMRMV 
LAGMPRADGR IDLVESRVPE TAAEADPPEV LVGGAAALRL HYFGVAPTEM QPRWLDAWTR 
RDRMPALVEI VLDFPPGDPR RWAPLVVPLE PLP