Gene M446_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1572 
Symbol 
ID6134014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1755803 
End bp1756444 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID641641838 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_001768507 
Protein GI170739852 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.494559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGC ACGTCGTCAT CGCCAAGCGC ATCGCCCGCG AACTCCGCGA CGGGATGCTG 
GTGAATCTCG GGATCGGCAT CCCGACCCTG GTCGCGAACC ACGTCCCCCC CGGGCTCACG
GTGTTCTTCC AATCGGAGAA CGGCTTGATC GGGACCGGCC CGGTCCCGGA GCCCGGCATG
GCCCTGCGCT GGCTGACCGA TGCGGGCGGC AAGGCCGTCA CGGCGCTTCC GGGCGCCTCG
GCCTTCGACA GCGCCACCTC GTTCGCGCTG ATCCGCGGCG GCCACCTCGA CCTGACCGTG
CTCGGCGGCC TCGAAGTCGA CCAGACCGGG CGCCTCGCCA ACTGGATGGT GCCGGGCCGG
ATGGTCCCGG GCATGGGCGG CGCGATGGAC CTGGTGACGG GAGCCAAGCG CGTCGTCGTG
GCCATGCAGC ACACCGCGAA GGGCCGGCCC AAGCTCGTTC GGGAATGCAC GCTGCCCCTC
ACCGCCGAGA GGCGGATCGA CCTCCTGGTG ACGGAGCTCG CGGTGATCGC ATTTCCGGAC
GGGCGCGCGA CCCTCGTCGA GACGGCGCCG GGCGTCAGCC TCGACGCCGT GCGCGCCGCC
ACCGAGGCCG ACCTCGCCAT CGCCCTCACC GAGGGCACGT GA
 
Protein sequence
MDPHVVIAKR IARELRDGML VNLGIGIPTL VANHVPPGLT VFFQSENGLI GTGPVPEPGM 
ALRWLTDAGG KAVTALPGAS AFDSATSFAL IRGGHLDLTV LGGLEVDQTG RLANWMVPGR
MVPGMGGAMD LVTGAKRVVV AMQHTAKGRP KLVRECTLPL TAERRIDLLV TELAVIAFPD
GRATLVETAP GVSLDAVRAA TEADLAIALT EGT