Gene M446_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1399 
Symbol 
ID6129505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1539328 
End bp1540014 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID641641679 
Producttwo component transcriptional regulator 
Protein accessionYP_001768349 
Protein GI170739694 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.11718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG CCCACCGCCT GCTCGTCGTC GACGACGATC CCTCGCTCCG CGAGACCCTC 
ACCGAGCAGC TCGAACTGCA CGCCGAATTC GCCGTGGCGA CGGAGGAGAC CGCCCAGGGG
GCGCTCGCCC GGGTCGCGGC CGAGCGCGTC GACCTCGTCG TGATGGATGT CGGGCTGCCC
GACCTCGACG GGCGCGAGGC GGTCCGGCAG ATGCGCCAGA GCGGCTTCCG CAGCCCGGTG
ATCATGCTGA CGGCCCAGAC CTCGGAGGCC GACACCGTGA TGGGCCTCGA CGCGGGCGCC
AACGACTACG TCACCAAGCC GTTCAAGTTC GCGGTGCTGC TCGCCCGCAT CCGGGCGCAG
CTGCGCCAGT ACGAGGCGAG CGAGGACGCG ATCTTCCAGA TCGGCCCCTA CACGTTCCGG
CCGGGCGCCA AGCTCCTCGT CGGCGAGCGC GGCTCGAAGC TGAAGCTCAC CGAGAAGGAG
ACCGCTATCC TGCGCTTCCT CTACCGGGCG GGCCGGCAGG TCGTCGGGCG CGACACCCTG
CTGGCCGAGG TCTGGGGCTA CAACGCCCAG GTCACGACCC ACACCCTGGA GACCCACATC
TACCGCCTGC GCCAGAAGAT CGAGCCGAAC CCCGCCGCCG CCTCGATCCT GGTGACGGAG
GGCGGCGGCT ACAAGCTGCT GCCCTGA
 
Protein sequence
MSNAHRLLVV DDDPSLRETL TEQLELHAEF AVATEETAQG ALARVAAERV DLVVMDVGLP 
DLDGREAVRQ MRQSGFRSPV IMLTAQTSEA DTVMGLDAGA NDYVTKPFKF AVLLARIRAQ
LRQYEASEDA IFQIGPYTFR PGAKLLVGER GSKLKLTEKE TAILRFLYRA GRQVVGRDTL
LAEVWGYNAQ VTTHTLETHI YRLRQKIEPN PAAASILVTE GGGYKLLP