| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1378 |
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| Symbol | |
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| ID | 6130212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 1515938 |
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| End bp | 1519105 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641641658 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001768328 |
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| Protein GI | 170739673 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.552774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0127558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA GGACCAAGCT TCTCGTCAGC CTGCTCGCCA TGGCGGCCCT CTGCGGCGGC
TGCGGGGCGG TGGGGCTGCT CTTCCTCGGC CGGGTCGATG CCAGCGTGTC GCGCTTCTCG
GAGGTGGCCA CCCCGCTCCT CGCCGAGAGC ACCGCCCTGG TCGAGGAGGT GCAGCGCATG
AGCGGCGCGT TCCTGGCGGA GATCGGCCAC GGCCGGCGCG AGCCGGACGG CGGCCCGACC
CTGCGCGCCA TGGGCGAGGA TGCGGGGCGG CGCCTCGGGC GCATCGGTTC GCTCGGGCGC
GAGTGGCTGG AACCGGAGCT GATCGCGCGC GGAACCCGCA ACGCGCAGGA TTTCACGCGC
CTGTCGCTCG ACCTGATCGC CGCGCACCGC CGCCGCGAGG AGACCCTGGC GGCGACCGAG
GCGCGGGCGC GGGAGGCCCT CGCGCTGCAG CAGCAGATCG ACGCCAAGCT CGTGCGCATG
GCCGCCCTGG CCGAGATCGC GATGGCCCGC AGCGAGGACG AGGCCAAGGT CGAGGCCCAG
ACGGGACGGG CGACGGTCGA GAGCCTGGGC GAGCGCTTCA CGGCCACGAT GACCGGCACC
TTCCCGACGC TTCAGACGGT CTACCGGCTG GTCCGCCTCA GCAGCGAGAT CCGCAACGCC
GCCGCGACCG CGCTGGCCCA GACCGATCCC GAGCGGCTGG CCGCCGAGCG GCGCCGGATC
GAGTCCGGGC TGCGCGGCGC CGGCGTGAGC CTCCGGCAGA TCGCGGGACG GATCCGCGTC
CTCGGCCAGG AGGAGGCCGA CCTCGCCGCC CTGAGCCAGA CCTTCGTCGC CCTCGAGGCG
TCCCTGCTGC GCGAGGACGG GGCGCTCGCC TCCCACGGCT GGAGGCTGGC GCTCGATGCC
GGGCTCGCCG AGGGGCGCGG CCGGCTGGAA GCGCTGGAGC GGGACTTCTA CGGCCTGATC
GCCCGGATCG ACCGGGCGGT GAGGAGCCGC AACGAGGCCG CCCGCACCGA GGCGGGCGCG
AGCGTGCACC GGGCGAAGCT GATCATCCTG GCCCTCACCG GGTTCGCCAT CCTGGCCAGC
ACGGTCCTGG CGCTTCGCCT CGCCGCTGCC GTGACCGGGC CGCTGGCGCG GCTGACGCAG
GGCGTGCTCG ACGTCCGGCC CGAGAGCATG GACGTCGCTG TGGACCCGGC CCTGGGTGCC
CGCGCGGACG AGTTCGGCAT CCTCGCCCGC TCCTTCGACA CGATGCTGCG CGAGGTGCGG
CAGGCCCGCC AGCAGCTGCT CGCGGCCTCG GAGGCCGAGA TCCGGCTGCA GTTCGAACGC
CTGGACGCGG CGGTCGCGAA CATGTCGCAG GGCCTGTGCA TGTTCGATGC CGGCGGGCGG
CTCATCATCG CCAACGAGCG CTACCGCGCG ATGTACGGCC ACGCCCCCGA CGAGGTGCGG
CCCGGAACCA GCCTGACGGC GCTCCTGAAG GCGCGGATCG CGCGCGGGTG CCAGCTCAAG
GCGGGCCAGC TGGACGCGGC GGAATGGCTC GCCGCCCACC GCACCGGGCA GGCCCACGTC
CGCATCGACG AGCTCGCGGA CGGGCGCGCC ATCGCGGTCA GCCTCCAGCC CCTGCCGGAC
GGCGGCTGCG TGGTGACCCA CGAGGACATC ACGGAACGGC GCAGGGCCGA GGAGCGGATC
GCCTTCCTGG CCTACCACGA CGTGCTGACC GGCCTTCCCA ACCGGGCCCG CTTCACCGCC
GCCCTGGTCG CCGCCCTCGA CGGCCGCGGC GCGCAGGCCG CGATCGCGGT GCTCTACCTC
GACCTCGACC ACTTCAAGGC CGTCAACGAC ACGCTCGGCC ACCCGGTCGG CGACGCGCTC
CTGCAGGCCG TGGCCGGGCG CATCCAGTCC TGCCTCCGGC CCCAGGACCT CGTCGCGCGG
CTCGGCGGCG ACGAATTCGC CATCGTGCAG GTGGGGCCGG ACCAGCCGGC AGGCGCGAGC
GACCTCGCCG GCCGGCTGAT CGCCGAGGTC GGCAGGCCCT ACGCGCTCAT GGGCCACCAC
GTGGTGGTCG ACACCAGCGT GGGCATCGCC CTGGCCCCGG CCGACGGCAC CGCCCCCGAC
CGGCTGATGA AGTGCGCGGA CATGGCCCTG TACCGGGCCA AGGGCGACGG GCGCGGCGCC
TACCGGTTCT TCGAGCCCGC GATGGGCGCG CAGATGGAGG AGCGGCGCGC GCTGGAGATC
GACCTGCGCC AGGCCGTGCG GGAGCGGGCG TTCCACCTCC ACTACCAGCC GCTCCTGAAC
CTGCGGACGA ACCGGGTGAG CGGCTTCGAG GCGCTGCTGC GCTGGACGCA CCCGCACCGC
GGCCCCGTGC CGCCCGACGG GTTCGTGCCG CTCCTGGAGG AACTCGGCCT CATCCGCGAG
GTCGGGGCGT GGGTGCTGGA GACGGCCTGC CGGGACGCCG CCGGCTGGCC GACGGACGTC
AAGGTCGCGG TGAACCTCTC GGCCCTGCAG TTCCGGGAGC GGGCCGTCGT GCGGGACGCC
GCCGCCGCGC TGGAGGCGTC GGGCCTGCCG CCCGGGCGGC TGGAACTGGA GATCACCGAG
ACGGTCCTGC TCCAGGACAC CGACGAGACC CTGGCGACGC TGCACGCCCT GCGCGAGAGC
GGCCTGCGCA TCTCGATGGA CGATTTCGGG ACCGGCTATT CGAGCCTGAG CTACCTGCGC
AGGTTCCCGT TCGACAAGAT CAAGATCGAC CGCTTCTTCG TGCAGGACCT GGAGACCAAG
GCGGATTCCG CCGCGATCGT GCGGGCGGTG ACGGGCCTCA GCCACGCCCT CGGGAATGAC
CACGGCGGCC GAGGGCGTGG AGACGCACCG CCAGCTCGAG AAGCTGCGGG CGGAGGGCTG
CACCGAGGTG CAGGGATTCC TGATCAGCCG GCCCCGCCCC GCCGCCGAGG TCGGGGCGAT
GCTGGAGCAA GCCGGCGCGA TCTTCGTGCC GCGGGCCGCC TGACGGCCCG CCTCGCGGGC
GGCCCGACGG CTCGCCTCCG CTCCCCGACC GGAGGCCGGG GCGGCCCCGA TCAGGTGTTC
ATCGAGTCGA AGAAGTCCTG GTTGCTCTTC GTCTGCCGCA GCTTGTCGAG CAGGAACTCG
ATCGCGTCGG TCACGCCCAT CGGGTTGAGG ATGCGGCGGA GCACGTAG
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| Protein sequence | MNVRTKLLVS LLAMAALCGG CGAVGLLFLG RVDASVSRFS EVATPLLAES TALVEEVQRM
SGAFLAEIGH GRREPDGGPT LRAMGEDAGR RLGRIGSLGR EWLEPELIAR GTRNAQDFTR
LSLDLIAAHR RREETLAATE ARAREALALQ QQIDAKLVRM AALAEIAMAR SEDEAKVEAQ
TGRATVESLG ERFTATMTGT FPTLQTVYRL VRLSSEIRNA AATALAQTDP ERLAAERRRI
ESGLRGAGVS LRQIAGRIRV LGQEEADLAA LSQTFVALEA SLLREDGALA SHGWRLALDA
GLAEGRGRLE ALERDFYGLI ARIDRAVRSR NEAARTEAGA SVHRAKLIIL ALTGFAILAS
TVLALRLAAA VTGPLARLTQ GVLDVRPESM DVAVDPALGA RADEFGILAR SFDTMLREVR
QARQQLLAAS EAEIRLQFER LDAAVANMSQ GLCMFDAGGR LIIANERYRA MYGHAPDEVR
PGTSLTALLK ARIARGCQLK AGQLDAAEWL AAHRTGQAHV RIDELADGRA IAVSLQPLPD
GGCVVTHEDI TERRRAEERI AFLAYHDVLT GLPNRARFTA ALVAALDGRG AQAAIAVLYL
DLDHFKAVND TLGHPVGDAL LQAVAGRIQS CLRPQDLVAR LGGDEFAIVQ VGPDQPAGAS
DLAGRLIAEV GRPYALMGHH VVVDTSVGIA LAPADGTAPD RLMKCADMAL YRAKGDGRGA
YRFFEPAMGA QMEERRALEI DLRQAVRERA FHLHYQPLLN LRTNRVSGFE ALLRWTHPHR
GPVPPDGFVP LLEELGLIRE VGAWVLETAC RDAAGWPTDV KVAVNLSALQ FRERAVVRDA
AAALEASGLP PGRLELEITE TVLLQDTDET LATLHALRES GLRISMDDFG TGYSSLSYLR
RFPFDKIKID RFFVQDLETK ADSAAIVRAV TGLSHALGND HGGRGRGDAP PAREAAGGGL
HRGAGIPDQP APPRRRGRGD AGASRRDLRA AGRLTARLAG GPTARLRSPT GGRGGPDQVF
IESKKSWLLF VCRSLSSRNS IASVTPIGLR MRRST
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