Gene M446_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1353 
Symbol 
ID6135224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1492819 
End bp1493601 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content79% 
IMG OID641641632 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001768303 
Protein GI170739648 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.742205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0116604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA CGGCCTCCCC CCTGCCGGAG GAAACCCGGC TCGCGGCCGC GATGGCCGCC 
GCGCAGGGCG GCGACGCCCG CGCCTATCGA ACCCTGCTGC GCGACTGCGT GCCGGTCATC
GCGGCCGTGG CGCGGGCCCA GGGCGTCCCT GCCTCCGCGG TGGACGACAT CGTGCAGGAG
ACGCTCCTCA CGCTGCACCG GGCCCGCGCC ACCTACGACC CGGCCCGCCC GTTCCTGCCG
TGGCTGCGCG CCCTCGCCCA GCGCCGGAGC GTCGACCACC TGCGCCGCTC CGCCCGCCGG
GTCGCGGAGG TGCACGCGCC CCTGGCCCTC GAGGGCGCCG CCGACCCCGC GCCGCTCGCC
CTCGACCGGC TCGCGGGGCG CGAGCGGCAC TCCCGCCTCG CCCGGGCGAT CGAGGCGCTG
CCCGGCGCGC AGAGGCTGGC GGTCGAGCAG CTCGTGGTGC GGGAGCGCTC CCTCGCCGAG
GCGGCGGCCG GGACGGGGCG CAGCAAGGGC TCGCTGAAGG TCAACCTCCA CCGCGCCCTC
CGGACCCTGC GGGCGATGCT GTCAGGGGAC GGGGAGGGGG ACGGGGAGCG GGAGGGCGCG
GGCTCCGGGA CCCTGCCGGC GCAGCGCCGA AGCGTCGCGA TTGATCGCCG GCCCGGTGCG
TCCGCATCCT GGGCCGTCGG CGCACCATCA CGAAGGGGGA ACGACATGCC CGTCCCGGCA
GCTCTCCGTC CGGCGCTCGC CGCGCCCGCC CGCGCTCCCT CGGACCGGAG ATCCAGGCGG
TGA
 
Protein sequence
MSRTASPLPE ETRLAAAMAA AQGGDARAYR TLLRDCVPVI AAVARAQGVP ASAVDDIVQE 
TLLTLHRARA TYDPARPFLP WLRALAQRRS VDHLRRSARR VAEVHAPLAL EGAADPAPLA
LDRLAGRERH SRLARAIEAL PGAQRLAVEQ LVVRERSLAE AAAGTGRSKG SLKVNLHRAL
RTLRAMLSGD GEGDGEREGA GSGTLPAQRR SVAIDRRPGA SASWAVGAPS RRGNDMPVPA
ALRPALAAPA RAPSDRRSRR