| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1340 |
|---|
| Symbol | |
|---|
| ID | 6135471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 1474420 |
|---|
| End bp | 1475445 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641641619 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_001768290 |
|---|
| Protein GI | 170739635 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.106965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGAG GGCGGCGGGG CTTGCCCCAG CGAGCGGGTT GGACGCGGCG GCGGCTGATC
GGGACGCTCC TCGGGCTCCT GCCCGCGCTC GTCGCCGGCC CGGCCGCGGC GCAGGTCCGG
TGGGTGATGG CGACCGAGTA CCCGGCCAGC ACCGTCTCGG GCGTCGGGCT GACGACCTTC
GCGCGGCGGG TGTCCGAGCG GACGCAGGGC GCCGTCGAGG TGGCGAACGC CCTCGACAAC
GCGCTGAAGA TCAGTTCGGG CGAGATGATC CGCGCGGCAC AGGACGGCCG GATCTCGGGC
GGCGACGCCT TCGCCGGGCC GCTCGAGGCC ACCGATCCGA TCTTCGGGCT GGCCTCCCTG
CCCTTCGTCG TCCAGTCCGT CGAGGCCGCC AGGGACCTGA ACGCGCGCGC GCGACCGCTC
TACGCGCGGG CCCTCGCGGC GCGGGGCCTC ACGCTCCTCT ACATGACGAT CTGGCCGCCG
ACCGGCCTCT GGACGGCGCG GCCCCTGGCC GGCCCGGACG ACCTCCGCGC GATGGCGATC
CGCGCCTACG ACCCCACCTC GGCCGAGGTG ATGCGGGCCG CCGGCGCGAA GGCGGAGTTC
ATGCCCTTCA GCGAGGCCGT CGCGAAGGTG AGGAGCCGCG ACCTGGACGG GATCCTCACC
TCCGGGGACG GCGGCGCCGG ACGCAGATTG TGGGACGACC TGCGCTACTT CACGGCGATC
AACTACGCGA TCCCGATCTC GCTGGCCGTC GTGCGGACCG ACGCGGTCGA GGCGCTGCCG
CCTGCGCAGC GCGAGGCGGT GCTGGCGGCG GCCGCGGAGA CCGAGCAGAG CCAGTTCGCG
CTGCTCGCGA CCCGCACGGC CGACAATTAC GCCCGGATGC GCGCGAACGG CGTGGCGATC
GCCGAGCCGG CCCCTCCGGC GCTCCTCGCC TCGCTCCGCG CGGGCGCCGC GGGGCCGATC
CGCGCCTGGG CGCGGAAGGT GCCGGAGGAG GCGGTCGCGA TCCTGGACGG CGCGGGGCCC
CGGTGA
|
|---|
| Protein sequence | MRRGRRGLPQ RAGWTRRRLI GTLLGLLPAL VAGPAAAQVR WVMATEYPAS TVSGVGLTTF
ARRVSERTQG AVEVANALDN ALKISSGEMI RAAQDGRISG GDAFAGPLEA TDPIFGLASL
PFVVQSVEAA RDLNARARPL YARALAARGL TLLYMTIWPP TGLWTARPLA GPDDLRAMAI
RAYDPTSAEV MRAAGAKAEF MPFSEAVAKV RSRDLDGILT SGDGGAGRRL WDDLRYFTAI
NYAIPISLAV VRTDAVEALP PAQREAVLAA AAETEQSQFA LLATRTADNY ARMRANGVAI
AEPAPPALLA SLRAGAAGPI RAWARKVPEE AVAILDGAGP R
|
|---|
| |