Gene M446_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1277 
Symbol 
ID6134496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1407949 
End bp1408731 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content75% 
IMG OID641641560 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001768231 
Protein GI170739576 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.151215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.259984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACAGAA CATCGAGACT GGTCCGAACC ACGGCGAGCG CGCGGCACGC GCCGACGCCC 
GTCCTCGCGT GCGCGCCGCT CTCGCATCGG GAGCCGGCGG CCCGGGAGCC CGCGGCGGCC
GATCGCCGGC CGCAGCTCGC GCCCTTCCTG CGCGACCATC TCGGCCGGCA GCTGCGAACC
GCCTACGCGG CCTTCGTCAG CGCGCCGCAC CCCTCGGAGG TGCGCGAGGC GATCGCGCGC
CTGGAGGCGG CCCTGGCGGG GCAGCCGGCC GTCGTCTCCC GCTTCCGCGA CGATCTGCTG
GCGGCGCTGC CGGCCTTGCG CGGCTTCGCC CTGTCGCTGA CGGCCAACGT GATCCAGGCC
GACGACCTTG TGCAGGAGAC GATGCTGCGC GCCTGGCAGA ACCAGCACCG CTTCGAGGTC
GGGACGAACC TCAAGGCGTG GCTGTTCACG ATCCTGCGCA ACCAGTTCTA CACGAACGGC
CGGCGGCGGC GCCGCGAGGT CGAGGATGCG GACGGCGCCG CCGCCGCGCA GCTGGTCTCC
CTCCCGGCCC AGGAGGACGG TGTCGAGCTG CGCGAGGTCT GGGCGGAGCT CGGCAGGCTG
CCGGCCGCGC AGCGCGAGGC CCTGCTGCTG GTCGCCATGC ACGGCATGAC CTACGAGGCC
GCCGCGGAGC TGATGAACTG CCAGGTCGGG ACGGCGAAGA GCCGGGTCAA TCGCGCGCGC
GCCGCCCTCG CGCAGGCGCT GGGCTACGAG GCGGGACGGC CCGGTCGCGC GGCCGGGCCG
TGA
 
Protein sequence
MHRTSRLVRT TASARHAPTP VLACAPLSHR EPAAREPAAA DRRPQLAPFL RDHLGRQLRT 
AYAAFVSAPH PSEVREAIAR LEAALAGQPA VVSRFRDDLL AALPALRGFA LSLTANVIQA
DDLVQETMLR AWQNQHRFEV GTNLKAWLFT ILRNQFYTNG RRRRREVEDA DGAAAAQLVS
LPAQEDGVEL REVWAELGRL PAAQREALLL VAMHGMTYEA AAELMNCQVG TAKSRVNRAR
AALAQALGYE AGRPGRAAGP