Gene M446_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1253 
Symbol 
ID6134331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1382241 
End bp1383212 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content58% 
IMG OID641641540 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_001768211 
Protein GI170739556 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACA TATGCCGGCT CGTCTGTGTT CTGGCTGCTA TGCTCCTTTC TACGGGGGTA 
GCTTTTCCTG CTGATCCCAA TTGGCCTGCC ACTCTGGTCA TTGGGACGGC ATCGCCGGGC
GGAACGTACT TTACTTATGG CGAGGGTTTG GCAAAGATCC TGACCCGCGA ACTTGGCATA
CCTGTTTCCG CACGGGCGAC AGAGGGCCCT GTTCAGAACA TTGCTCTTCT GGAGAAGGGC
GAGATCCAGT TGGCTTTCGC GACGCTCGGG GTCGCCTTGC AGGCTTGGAA CGGAACAGGC
GCGGGGAGCC AAGGCAAGCC GTTCCGCGAG ATGCGCGCGT TGTTTCCCAT GTATGACACT
CCGTTCCAGT TGGTCGTGAT GCACGGGTCA ATCATTCAGT CGGTTGCTGA TCTCGCTGGA
AAGCGCATTG GTTCCGGCCC GCAAGGGGGC ACTACGGCCA CCTACATGCC CGAGATGTTG
AAGGCGCTTA AGATCGAGGC TCCCTTGATC TATGGAGACT GGGCCGATCT CGCTCAGCAA
CTTCGCACAG GAGCGCTTGA TGCTCTCGCG GTCGCGGCCG GTGTTCCGTT CCCGTCCTTT
CTCGATCTTG AAACAAACGG CAAGCTGCGT TTCCTTCACG TCACTACTCA GCAAATCGCT
GTCCTCCGCT TGACGCACCC CGAGCTGCAA CTGTCGACTG TACCGCCGGG GATCTATGCC
TCGCTTCCGA CCCCATATCA GACCGTTGGG CTTTTCAATT TTGCCGTGGG TCGGATGGAT
CTGCCCGACA ATCTTGTATA TGCGATCTTG GATGCCGTGT TTTCACATCA GGATGAGCTG
ATCGGCACGC ATCCCGCTGC GACCGAAACC GTTCCGGCCA ACTTCACACG CAACATGTTC
CTTCCGTTTC ACAACGGCGC GGATCGCTGG TACCGCAATC ATGCCGCTGG CGGGACTGAG
CAGGGCGATT AA
 
Protein sequence
MRHICRLVCV LAAMLLSTGV AFPADPNWPA TLVIGTASPG GTYFTYGEGL AKILTRELGI 
PVSARATEGP VQNIALLEKG EIQLAFATLG VALQAWNGTG AGSQGKPFRE MRALFPMYDT
PFQLVVMHGS IIQSVADLAG KRIGSGPQGG TTATYMPEML KALKIEAPLI YGDWADLAQQ
LRTGALDALA VAAGVPFPSF LDLETNGKLR FLHVTTQQIA VLRLTHPELQ LSTVPPGIYA
SLPTPYQTVG LFNFAVGRMD LPDNLVYAIL DAVFSHQDEL IGTHPAATET VPANFTRNMF
LPFHNGADRW YRNHAAGGTE QGD