| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1228 |
|---|
| Symbol | |
|---|
| ID | 6134103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 1346146 |
|---|
| End bp | 1347603 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641641515 |
|---|
| Product | MmgE/PrpD family protein |
|---|
| Protein accession | YP_001768186 |
|---|
| Protein GI | 170739531 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.996251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGA CCGCTTCAGG ACATGGCACG GATCGACGCA AGTTCCTGCA AGTGACGGGC
AGCCTCCTAG CCGCAGCCGC CAGTCCCGTG CGGGTGGCCG CGGCCGGTGG CGAGGTCACC
GGACAGCTCG CCCGCTACAT GGTCGAGGCG CGGGACCGGC CTTTGCCGCC CGAGGTCGTG
CAGGCCTGCA AGCACCGCAT CCTTGACACC TTCGGCGCCA TGATCTCCGG CGCTCGCATG
CGGCCTGGCG AGTTGGCGAC GGCCTATGTG CGCGGCCTCA GCGGCACCGA TCAGGCCACC
GTCGTCGCCT CCGACCTGCG CACGACCGCG ATCAACGCGG CGCTCGCCAA CGCCATGTGT
GCCCACGCGG ACGAGACGGA CGACTTCGAG CCGGTCACCA AGGCGCATCC GGGCTCCGCG
ACCGTGCCCG CAGCTCTCGC GATGGCCGAG AAGGAGGGCC GCTCCGGCCT GGAGATGATC
CGCGCCGTGG CGCTCGGCTA CGATCTCTGC TGCCGGCTGC TGCTGGCGCT CGGGCCAGAC
CTTGTGCGCG GCTCCCACCG TAGCGCAGAG GGCACGAGCT CGACCTTCGG TGCGCTCGGG
GCGGCCGCCA CACTCGCCCG CCTCGACGAG CGGAGCACGC GCTTCGCGCT GTCCTACGCG
GCCCAGCAGG TCTCGGGCCT GTGGAGCTGG GTGAAGGACG AGGACCACAT CGAGAAGGCG
TTCGACTTCG CCGGCATGGG CGCCCGCAAC GGCGTCACTG CCGTCTCCAT GGTTCAAGCC
GGCCTGACCG GTGTCGCTGA CGTCCTCGAC GGGACGCACA ACCTGTTCAT CGCGCTCTCA
AGCGACCCAA AGCCCGAGGC GATGCTGGAG GGGCTCGGGA GCCGCTTCTT CGTCACCGAG
ACCGCGATCA AGACCTTCTC GGTCGGGTAC CCGATCCAGT CGCCGCTCGA CGCGGTTTTG
ACCTTGCGCG AGCGCCACGG CCTGCGGGCC ACCGATGTGC GACGGGTCGT GGTGCATCTG
CCGACCGACG CGGTCGGCAT CGTCGGGCAC AGCGCCATGC CAGACGTGAA CTGTCAGCAC
CTCGTCGCGT TGGCGCTCGT GAAGGGGGCC GTCTCCTTCG CCGACAGCCA TGATCCGAGG
CTGATGCAGG AGCCATCCAT CCAGTCCGTG CGGGAGAAGG TCGAGGTGGT GGGCGATCCC
GGCCTGATGA CACGGGAGGC TCCGCGCAGC GCGCGGGTCG AGGTGATCCT TGCCGACGGG
CGCAGGCTCG AGCACTTCAC GAAGTTTCCG CCGGGAACGA AGGAGAACCC CCTGAGCACG
GAGCGGGTTA ACGCGAAGGT TCGCGACCTG ATCGTGCCGG TGCTTGGGGT ATCGCGCGCG
GACGACCTGA TTGCGCGTAT CAACGACCTC GAAAATCTTG AGGACGTCCG AGCACTACGG
CAATTGTTCG CGCCCTGA
|
|---|
| Protein sequence | MSQTASGHGT DRRKFLQVTG SLLAAAASPV RVAAAGGEVT GQLARYMVEA RDRPLPPEVV
QACKHRILDT FGAMISGARM RPGELATAYV RGLSGTDQAT VVASDLRTTA INAALANAMC
AHADETDDFE PVTKAHPGSA TVPAALAMAE KEGRSGLEMI RAVALGYDLC CRLLLALGPD
LVRGSHRSAE GTSSTFGALG AAATLARLDE RSTRFALSYA AQQVSGLWSW VKDEDHIEKA
FDFAGMGARN GVTAVSMVQA GLTGVADVLD GTHNLFIALS SDPKPEAMLE GLGSRFFVTE
TAIKTFSVGY PIQSPLDAVL TLRERHGLRA TDVRRVVVHL PTDAVGIVGH SAMPDVNCQH
LVALALVKGA VSFADSHDPR LMQEPSIQSV REKVEVVGDP GLMTREAPRS ARVEVILADG
RRLEHFTKFP PGTKENPLST ERVNAKVRDL IVPVLGVSRA DDLIARINDL ENLEDVRALR
QLFAP
|
|---|
| |