Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_1175 |
Symbol | |
ID | 6131807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 1301397 |
End bp | 1303790 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641641462 |
Product | general secretion pathway protein D |
Protein accession | YP_001768134 |
Protein GI | 170739479 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.217594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGGGA GGGCGAAGGC TTGGCGCGCC GTCCTCGAGA TGGCGCTCGC CCTCGGGAGC GGCGGGACTC CGCCGGCGGG CGCCTCCGAC TACGGCCTGC GCGGCGCGAT CGAGAGCGGC CCGCCCGCCG GCCCGGCCCC GGCGCTGGTG CGGCGGGGCA CCGACGTCTT CGTGCGCGGC GCGAGGGAGG CGGCCGCGCC GCTCCCGGAG GGCAACGTCA CGCTCAACCT CGTCAACGCC CCGGTGGCGG TGGCGGCGCG GGCGGTGCTC GTGGACGCGC TCGGCTGGAG CTACAGCCTC GACGAGCGCG TCGCCGGCAC CGTCACCCTG CAGACGGCGG GGCCGGTCAG CCGCGCGGCC CTGCTCGGCC TGTTCGAGAG CGCGCTCGCG GCGCGCGGCG TCACCCTGCG CCGCCGGGGC AGCCACGTGC AGATCCTCCC CGCGGGCGCC CCGCCGCCGC CCTCCGGGGT GCGCGGCACG CCCGATGCCG CGGGCGAGCC CGGGGCGCAG GTCATCCCCC TGCGCTGGAT CTCGGCGGGC GAGATGCAAT CCATCCTCGC GGCGGTGGCG CCGCGCGACC TCGTCCTGCG GGCCGACCGC ACCCGCAACC TGCTCATCGT CTCCGGCGAC CGCGCCCAGA TCCAGGCCCT GCGCGAGACG ATCGCGGTCT TCGACGTCGA CTGGATGCGC GGCCTCTCGG TGGCGATGGT GCCGGTGCGG CGGGCGAATC CCTCGGCGAT CGCCCGCGAC CTGGCGGAGG TGTTCGGCGG CGAGGCCTCG GGGGCGGGCG CGATGATCCG CTTCCTGCCC AACGAGGCGC TCGGGGCGAT CCTGGTGGTG AGCTCGCGCG CCCTCTACCT CGACCGGGCG CGGGAATGGA TCGCCCGGCT CGAAGTCGTG GCGGCCGATC GCGAGCGGCA GCTCTTCGTC TACCGCATCC AGAACCGCTC GGCGAAGGAG CTCGCCGCCG TGCTCCAGGG GGTCGTCTCC TCCGACCCGA CCATGGCGAG CGCGCCGGGC GCCGCCGCCT ACGGTTCCGC GGGCGGCGGG GCGGGCCTGA GCGGCGGCTT CGCCGATGCG GGCGGCTTCG GCGGCTTCGG CGGCGGGGCG GCCGGGACGG GTCCGGCGGG CGCGGGAGGG TTCGGCGGCC CGCCGGGCGG CGCCGGCGCT CCCGCGGGCG GGGGGCCGGG GGCAGGCCCG TCCGGCGCCT TCGGCGGCGG ATCGCCCGGC GCCTTCGGGG GGCCGGCCGC TGCCCTCGGC CCGGGCGGGG CCGGGTCCGG CGTCTCCGGC GCCGGCGGGT TCGGCGGCGG GGCCATGGAG GCGGGCTTCT CGGGCAGCGC CCTCTCCGGC ATGGGCGAGG CCGGGGGCTC GGGCGCGGTC TACGGCAGCG GCGCGCGGCG GGGCGGGATC GGCATCGTCG CCGACGAGAC CAACAACAGC CTCGTGATCT CGGCGACCCG GACCCAGTAC GAGAAGATCC TCCGGATCCT CGGCCGCCTC GACGCGCGCC CGACCCAGGT GCTGCTGGAG ACGGTGATCG CCGAGGTGAC GCTGAACGAC AAGCTCGAAT TCGGGGTGCA GTGGTTCCTG AAGAACGGGG GCTCGCGCTT CAACCTCGCC CAGTCCGACA CGGCGGCGTC GGTCGCGAGC GGGACGAGCG GCGCCGGCGC CCTGGTCAGC GCGGCGATGC GCGGCGTGCC GGGCTTCAAC TACCTGCTCA ACGACGCGGA TTTCCACGTC GTGCTCAACG CCCTGCGGGG CGTGACCCGG GTCAACGTGC TCTCCTCGCC CAACATCACG GTGCTCGACA ACCGCACCGC GCGCCTCCAG ATCGGCGACC AGGTGCCGAT CGTGAAGCAG AGCGGCCAGA GCGCGCTCGC CGGCAACGCG CCGATCCTCA ACCAGATCGA GCTCAAGGAC ACCGGCGTGA TCCTCTCGGT CACGCCGCGG GTGAACAAGA ACGGGCTCGT CGTCCTCGAC ATCAACCAGG AGGTCAGCGA CGTCGTGCCG ACCACGACGT CGAACATCAA CTCGCCCACC ATCCGCCAGC GGCGGGTCGC GACCTCGGTG GCGGTGTCGG ACGGGCACAG CCTGGCGATC GGCGGCATGG TCCAGGAGAA GGCGCAGATC GGCACCGAGG CCCTGCCGGT GCTCGGCGAC CTCCCGGTGA TCGGCCCCGC CTTCCGCAAC AAGTCGGATC TGCGCGTGCG CACGGAACTG ATCGTGTTCC TGCGCCCGAA GGTGATCCGC GGCACGGCCG ACGCCGACCG CATCGCCAGC GACTTCCGCG ACCAGGTCCG GACGATGATG CCGGTGCGCC CGGTCAGCGC GCCGCCGCCT CTGGAAGAGG TGCCAGCCGG AGTGCAGGGG CTGCGCCAGC GGATCCTGGA CTGA
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Protein sequence | MRGRAKAWRA VLEMALALGS GGTPPAGASD YGLRGAIESG PPAGPAPALV RRGTDVFVRG AREAAAPLPE GNVTLNLVNA PVAVAARAVL VDALGWSYSL DERVAGTVTL QTAGPVSRAA LLGLFESALA ARGVTLRRRG SHVQILPAGA PPPPSGVRGT PDAAGEPGAQ VIPLRWISAG EMQSILAAVA PRDLVLRADR TRNLLIVSGD RAQIQALRET IAVFDVDWMR GLSVAMVPVR RANPSAIARD LAEVFGGEAS GAGAMIRFLP NEALGAILVV SSRALYLDRA REWIARLEVV AADRERQLFV YRIQNRSAKE LAAVLQGVVS SDPTMASAPG AAAYGSAGGG AGLSGGFADA GGFGGFGGGA AGTGPAGAGG FGGPPGGAGA PAGGGPGAGP SGAFGGGSPG AFGGPAAALG PGGAGSGVSG AGGFGGGAME AGFSGSALSG MGEAGGSGAV YGSGARRGGI GIVADETNNS LVISATRTQY EKILRILGRL DARPTQVLLE TVIAEVTLND KLEFGVQWFL KNGGSRFNLA QSDTAASVAS GTSGAGALVS AAMRGVPGFN YLLNDADFHV VLNALRGVTR VNVLSSPNIT VLDNRTARLQ IGDQVPIVKQ SGQSALAGNA PILNQIELKD TGVILSVTPR VNKNGLVVLD INQEVSDVVP TTTSNINSPT IRQRRVATSV AVSDGHSLAI GGMVQEKAQI GTEALPVLGD LPVIGPAFRN KSDLRVRTEL IVFLRPKVIR GTADADRIAS DFRDQVRTMM PVRPVSAPPP LEEVPAGVQG LRQRILD
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