Gene M446_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1115 
Symbol 
ID6131955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1240762 
End bp1242993 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content70% 
IMG OID641641405 
Product1A family penicillin-binding protein 
Protein accessionYP_001768077 
Protein GI170739422 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.331133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.670301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTGA ACCGGCTTGC CTCGCTCTGG ACGCGCCTCA ATCGCGCCGC CCTCGGATTC 
GACGCCTGGG TGAATGCGAG CCTCTACGAG GGCGGCGCCG GGCTCGGCGA ATCCTATTCC
CGCTTCTCCG ACGCGATGCG GCGGCGCTTC ACCGTGCGGG GCGTCAAGCG CCTGATCCTC
GACCTGTCGA GCGAGGCGGT GACCCTCACC CTCGGCGGCG CCGTCGTCAT GGTCACCCTG
GCCCAGCCCG CCTTCAACCA GACCAGCGAG AACTGGCTGA AGGCCCAGGA CCTCGCCGTC
ACCTTCCTCG ACCGCTACGG GACCGAGGTC GGCCGGCGCG GCATCAAGCA CGACGATTCC
CTGCGCATCG ACGAGTTCCC GGACATCCTG GTCAAGGCCC TGATCTCGAC CGAGGACCGC
CGCTTCTACG ACCATCTCGG CATCGACCCG ATCGGCACCC TGCGGGCGCT CACGGTGAAT
GCCCGCGGCG GCGGCCACGT CCAGGGCGGC TCCTCGCTGA CCCAGCAGCT CGCCAAGAAC
CTCTTCCTGA CCAACGAGCG CACCCTCCAG CGCAAGATCA ACGAGGCCTT CCTGGCCCTC
TGGCTGGAAT GGCACCTCAC CAAGAACGAG ATCCTGAAGC TCTACCTCGA CCGGGCCTAT
ATGGGGGGCG GCACGTTTGG GGCGGCGGCC GCCGCCGACT ATTATTTCGG CAAGAACCTC
AAGGACATCT CGCTGGCCGA GGCGGCCATG CTGGCGGGCC TGTTCAAGGC GCCGACGAAG
TACGCGCCGC ACGTGAACCT GCCGGCCGCC CGCGCCCGCG CCGCGGACGT GCTGCACAAC
ATGGTCGAGG CCGGCTACCT CACCGAGGGC CAGATCCAGT CCGCCCTGCG CAACCCGGCG
ACGCCGGTGA CGCGCTCGCG CGACATCAGC GCCGACTACT ACCTCGACTG GGCCTTCAAC
GAGGTGAAGC GCCTCGCCGA CGAGGGCAAG CTCAAGCGGG AGCGGGTGCT CGTCGTCAAG
ACGCCCCTCG ACCTGTCGAT CCAGCGGCGG GCCGATCAGG CCGTCGAGAA CATCCTGCGC
CAGTTCGGCG ACGCCTTCGA CGTCGAGCAG GCCGCCCTCG TCACCATGGA CCCGGACGGG
GGCGTGCGGG CGATGGTGGG CGGCGCCGAT TACGGCCAGA GCCAGTTCAA CCGCGCCACC
GACGCGCTGC GCCAGCCGGG CTCGTCCTTC AAGCCCTACG TCTACGCGGC GGGGCTCTCC
ACCGGCCTGT GGCGGCCCGA CAGCAAGGTG GTGGATTCCC CGGTCTGCAT CGGCAATTGG
TGCCCGGCCA ATTACGGCCG CTCCTTCGCC GGCACGGTGC CGCTCTGGGT CGCGGTCGCG
AAGTCGATCA ACACGATCCC GGTCAAGTTC TCGATCGCCA TGGGCAAGGC GACGGGCGAG
ACGCACGAGG CGCGGGCCGC CAAGCTCGGC CGGGCCAAGA TCATCGACAC CGCCCACCGG
ATGGGCATCA CCAGCAACCT CGTCGATTCG GTCTCCCTGC CGATCGGCTC GGCCGAGGTG
ACGGTGATCG ACCAGGCGGC CGGCTACGCG GTCTTCGCCA ACGGCGGCAA GCGCGCCAAG
CCCTACGCCG CCGTGGAGAT CCGCACCTCC GCCGGCGAGG TGATCTACCG CCACGACACG
AGCGAGCCGC CCCCCGAGCA GGTGCTCTCG ACCCGCGTCG TGGCCGACAT GAACTTCATG
CTCAACAAGG TCGTGGAGGA GGGCACCGGC CGCAAGGCGC AGGTCGAGGG CGTGAAGACC
GCCGGCAAGT CCGGCACCAC GAACGCCTAC CGGGACGCGT GGTTCGTCGG CTACACGGGC
AACCTCGTGA CCGCGGTCTG GTACGGGAAC GACGACCATT CCTCGAGCAA GAACATGACC
GGCGGCTCGC TGCCCGCCAT GACCTTCCAC GAGGTGATGG CGCCGGCCCA CCAGGGGATC
GAACTCAAGC CGCTGCCCGG CTTCGAGGGC GACAAGCCGG GCGCGGTCGC CGCGAAGGCC
CCGGCCCCGG CCCCGCCGCC CGGCGCGCCT CCCGGCACGA TCTCGCGGCG CTCCTTCGAG
GTGCTCGGCG GCATCGGCAG CCTGTTCCGC GCCGTCGAGC CCGCGCCCGG CCGCTCCGCC
ATGCGGGAGG TGACCGCACC CGGCAGCGTC GCCGAGGGCG GCCGCCCGGC CGGACGGCTC
GTCACGCGCT GA
 
Protein sequence
MPLNRLASLW TRLNRAALGF DAWVNASLYE GGAGLGESYS RFSDAMRRRF TVRGVKRLIL 
DLSSEAVTLT LGGAVVMVTL AQPAFNQTSE NWLKAQDLAV TFLDRYGTEV GRRGIKHDDS
LRIDEFPDIL VKALISTEDR RFYDHLGIDP IGTLRALTVN ARGGGHVQGG SSLTQQLAKN
LFLTNERTLQ RKINEAFLAL WLEWHLTKNE ILKLYLDRAY MGGGTFGAAA AADYYFGKNL
KDISLAEAAM LAGLFKAPTK YAPHVNLPAA RARAADVLHN MVEAGYLTEG QIQSALRNPA
TPVTRSRDIS ADYYLDWAFN EVKRLADEGK LKRERVLVVK TPLDLSIQRR ADQAVENILR
QFGDAFDVEQ AALVTMDPDG GVRAMVGGAD YGQSQFNRAT DALRQPGSSF KPYVYAAGLS
TGLWRPDSKV VDSPVCIGNW CPANYGRSFA GTVPLWVAVA KSINTIPVKF SIAMGKATGE
THEARAAKLG RAKIIDTAHR MGITSNLVDS VSLPIGSAEV TVIDQAAGYA VFANGGKRAK
PYAAVEIRTS AGEVIYRHDT SEPPPEQVLS TRVVADMNFM LNKVVEEGTG RKAQVEGVKT
AGKSGTTNAY RDAWFVGYTG NLVTAVWYGN DDHSSSKNMT GGSLPAMTFH EVMAPAHQGI
ELKPLPGFEG DKPGAVAAKA PAPAPPPGAP PGTISRRSFE VLGGIGSLFR AVEPAPGRSA
MREVTAPGSV AEGGRPAGRL VTR