Gene M446_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1111 
Symbol 
ID6131929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1236920 
End bp1238335 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content73% 
IMG OID641641401 
Productmajor facilitator transporter 
Protein accessionYP_001768073 
Protein GI170739418 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.694582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.527178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCTG CCCGGATCGT CCCCCTGGTC GTCGCCACGG CCCTGTTCAT GGAGAACACG 
GATTCGACCG TGATCGCGAC CTCGCTCCCG GCGATCGCGG CGGATCTGGG CGAGGACCCG
ATCGCCCTGA AGCTCGCCCT CACCTCCTAC CTGGTGAGCC TCGCGATCTT CATCCCGGTC
AGCGGCTGGA TGGCGGACCG GTTCGGGGCG CGCACGGTCT TCCGCCTCGC GCTCGCCGTG
TTCATGGGCG GCTCGCTCGC CTGCGCGGCG GCCGATTCCC TCGGCTGGTT CGTGGGCGCG
CGCTTCCTGC AGGGCATGGG CGGGGCCATG ATGGTGCCGG TGGGGCGGCT CGTGCTCCTG
CGCAGCGTGC CGAAGGCGGA ACTCGTCCAG GCGCTCGCCA CCCTGACGAT CCCGGCCCTG
GTCGGCCCGG TGATCGGCCC GCCGCTCGGC GGCCTCATCA CCACGACCCT GAACTGGCGC
TGGATCTTCT TCATCAACCT GCCGATCGGC CTCGCCGGCA TCCTGCTGGC GACCCGCTAC
TTCGCCGACC TGCGCGAGGC CGAGCGCCCG CCCCTCGACG GGGTCGGCTT CGTGCTCTCG
GGGGCCGGGC TCGCCAGCCT GATGCTCGGC CTGGCCTCGG GCGGGCGCCA CCTCCTGCCC
GCTTCCGTGT CGTGGGGCTG CGTCGGGGCC GGGCTCGCGC TGCTCGCGCT CTATTGCGGC
CATGCGCGCC GCACCGCCCA CCCGCTGATC CGCCTCGACC TGATGGGCTA CCCGACCTTC
CGGGCGGCGA TCACCGGCGG CAGCCTGTTC CGCATCGGCA CCGGGGCGAT CCCCTTCCTG
CTGCCGCTGA TGCTGCAGCT CGGGTTCGGG CTCGACCCGC TGCATTCGGG CCTGCTCACC
TTCGCGGCGG CCGCGGGGGC GCTGTTCATG AAGACCCTGG CGGCCCGCAT CCTGCGGTCC
CTCGGCTTCC GCACGGTGCT GACGGTGAAC GCCGTTCTGG CCGCCTGCCT GCTCGCCGCG
AACGGCCTGT TCACTCCCTC GACCCCGCAC GCGCTGATCG TGGCGGTGCT GCTGATCGGC
GGCTGCTTCC GCTCGCTGCA ATTCACCGCC GTCAACGCCA TCGCGTACGC GGACGTGGAT
TCGCGCGACA TGAGCGCGGC GACGAGCCTC GCCAGCGTGG CCCAGCAGCT CTCCCTCAGC
ATCGGGGTGG CGTTCGGGGC CTTCGCGCTC GAGAGCGCCG CGCAGTGGCA CGGGCGCGCC
TCCGTGCGGT CGGAGGATTT CTGGCCGGCC TTCCTGGCGG TGGCGCTCGT CTCGGGCCTG
TCGGCCTTCG CCTTCGCGCG CCTCGCCCCG ACCGCCGGGG CCGAGGTCTC GGGCCACCGC
CGCGTCACCG CGCGGCCGGC CGCGGACGCG ACCTGA
 
Protein sequence
MRPARIVPLV VATALFMENT DSTVIATSLP AIAADLGEDP IALKLALTSY LVSLAIFIPV 
SGWMADRFGA RTVFRLALAV FMGGSLACAA ADSLGWFVGA RFLQGMGGAM MVPVGRLVLL
RSVPKAELVQ ALATLTIPAL VGPVIGPPLG GLITTTLNWR WIFFINLPIG LAGILLATRY
FADLREAERP PLDGVGFVLS GAGLASLMLG LASGGRHLLP ASVSWGCVGA GLALLALYCG
HARRTAHPLI RLDLMGYPTF RAAITGGSLF RIGTGAIPFL LPLMLQLGFG LDPLHSGLLT
FAAAAGALFM KTLAARILRS LGFRTVLTVN AVLAACLLAA NGLFTPSTPH ALIVAVLLIG
GCFRSLQFTA VNAIAYADVD SRDMSAATSL ASVAQQLSLS IGVAFGAFAL ESAAQWHGRA
SVRSEDFWPA FLAVALVSGL SAFAFARLAP TAGAEVSGHR RVTARPAADA T