Gene M446_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1084 
Symbol 
ID6131614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1207868 
End bp1210237 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content72% 
IMG OID641641374 
ProductUvrD/REP helicase 
Protein accessionYP_001768046 
Protein GI170739391 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.305736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCG ATGCCGCCGG GGCCGAGGCG CCCGCCCCCA CCTCGATCGC AGCCCGCGCG 
AGGGCCGCCG TGGCGCCTCC CGGGGCGGCC TATCTCGACG GGCTCAATCC GGAGCAGCGC
CGCGCCGTCG AGGCGACGGA GGGGCCCGTC CTGGTCCTGG CCGGCGCGGG CACCGGCAAG
ACGCGGGTGC TGACCACGCG CATCGCCCAC CTGATCGCCA TCGGCCGCGC CCGGCCCTTC
GACATCCTGG CCGTGACCTT CACCAACAAG GCCGCGCGGG AGATGAAGGA GCGCATCGGC
GGCCTGATCG GCGCGGCCGG CGAGGGCATG CCCTGGCTCG GCACGTTCCA CGCGATCGGC
ACCAAGATCC TGCGCCGCCA CGCGGAGCTG GTCGGGCTGC GATCCGACTT CACCATCCTG
GGCACCGACG ACCAGCTGCG CCTGCTCAAG CAGGTGATCG AGGCGGCGGG CATCGACGAG
AAGCGCTGGC CCGCCCGCGG CCTCGCCCAG GCCATCGACG GCTGGAAGAA CCGCGGCCTC
GCCCCCGACC AGGTGCCGGC CGGCGAGGCC GGCGCCTTCG GCTTCGGCAA GGGCGGGCCG
CTCTACGCCG CCTATCAGGA GCGCCTCGCC ACCCTCAACG CGGTCGATTT CGGCGACCTG
CTCCTGCTCT GCCTCAAGCT CTGGCGCGAG AATCCCGACA TCCTGGCGAG CTACCAGGAC
CGCTTCCGCT ACATCCTGGT CGACGAGTAC CAGGACACCA ACGTGGCGCA GTATCTCTGG
CTGCGGCTCC TGGCCCAGGG CCGCCGCAAC GTCTGCTGCG TGGGCGACGA CGACCAGTCG
ATCTACGGCT GGCGCGGCGC CGAGGTCGAC AACATCCTGC GCTTCGAGCA CGATTTCCCG
GGCGCCGTGG TGGTGCGGCT GGAGCGCAAC TACCGCTCGA CGGGCCACAT CCTGGCCGCG
GCGGCGACGC TGATCGCCCA CAACGAGGGG CGGCTCGGCA AGACCCTGCG CACGGAGGCC
GGCGCGGGCG AGCCCGTCAC GGTGACGGGC GCCTGGGATT CCGAGGAGGA GGCGCGCCTC
ATCGGGGAGA CCATCGAGGG CCTGCAGCGG CAGGAGCATC CCCTGGCGCA GATCGCCGTG
CTGGTGCGCA CCTCCGCCCA GATGCGCGAG GTCGAGGACC GCTTCGTCCA GCTCGGCCTG
CCCTACCGGG TGATCGGCGG CCCGCGCTTC TACGAGCGGG CCGAGGTGCG CGACGCGCTC
GGCTACCTGC GCCTGACCGC CAACGGGGCG GACGACCTCG CCTTCGAGCG CATCGTCAAC
ACGCCCAAGC GCGGGCTCGG CGACGCCACC CTGCAGGCCC TCCACGGTGT CGCGCGGCGG
CGCGCGGTGC CGCTCCTGCA CGCGGCCCGG CTGATCGTCG AGACGGAGGA GCTGAAGCCC
AAGCCCCGCT CGACCCTGCG GGCCCTGGTG CAGTGCTTCG ACCGCTGGGC GAAGCTCCTG
GAGGGGCGGC CCCACGCCGA GGTGGCCCAG ATCATCCTGG AGGAATCCGG CTACACCGAG
ATGTGGCAGA AGGAGCGCAC CGCCGACGCC GCCGGCCGGC TGGAGAACCT CAAGGAACTG
GTGCGCTCGC TGGAGGAGTT CCCCGACCTG CCGGCCTTCC TGGAGCACAT CGCGCTGGTG
ATGGACGCCA ACGAGGCGGA GGGCGGCGAC CGCGTCAGCC TGATGACGCT GCACGCCGCC
AAGGGGCTCG AATTCGACAC GGTCTTCCTG CCGGGCTGGG AGGACGGGCT GTTTCCCAAC
CAGCGCGCCC TCGACGAGAG CGGCCGGGCC GGGCTGGAGG AGGAGCGGCG CCTCGCCCAT
GTCGGGCTCA CCCGGGCCCG CAAGCGCGCC AAGATCTCCT TCGCGGTCAA CCGCCGCATC
CACGGCCTGT GGTCCTCGAC CATGCCGAGC CGCTTCATCG ACGAATTGCC CGAGGCGAGC
GTGAGCGTGA TCGAGGCGCC GGCGAACTTC TCCCACGGCC CCTCGCGCTT CGACCGGCAG
GCGACGCCCT TCGGCTCCTC CTACGCGACC CCCGGCTGGC AGCGCGCCCA GGCGGCCACG
GCCGGACAGG AGCGCTTCGG CGGCCAGGGC CGCCCGGGCG AGCCCCGCTT CGGCGAGGGC
CGCGGCGCGC GCGGCGCCCC CAGGCAGATC GAGGGAACGC TGGTGGCGAA GTCGACCGGC
ACTGCGTCAG ACTACGTAGC GGGCGCGCGT GTCTTCCACA CGAAGTTCGG CCCCGGCTCG
GTCGCGGCGG TCGACGGCAA CAAGCTCACG GTTGACTTCG ACAAGGCCGG CCGGAAGATG
GTCCTCGACA GTTTCGTCCA GCCGACCTGA
 
Protein sequence
MTRDAAGAEA PAPTSIAARA RAAVAPPGAA YLDGLNPEQR RAVEATEGPV LVLAGAGTGK 
TRVLTTRIAH LIAIGRARPF DILAVTFTNK AAREMKERIG GLIGAAGEGM PWLGTFHAIG
TKILRRHAEL VGLRSDFTIL GTDDQLRLLK QVIEAAGIDE KRWPARGLAQ AIDGWKNRGL
APDQVPAGEA GAFGFGKGGP LYAAYQERLA TLNAVDFGDL LLLCLKLWRE NPDILASYQD
RFRYILVDEY QDTNVAQYLW LRLLAQGRRN VCCVGDDDQS IYGWRGAEVD NILRFEHDFP
GAVVVRLERN YRSTGHILAA AATLIAHNEG RLGKTLRTEA GAGEPVTVTG AWDSEEEARL
IGETIEGLQR QEHPLAQIAV LVRTSAQMRE VEDRFVQLGL PYRVIGGPRF YERAEVRDAL
GYLRLTANGA DDLAFERIVN TPKRGLGDAT LQALHGVARR RAVPLLHAAR LIVETEELKP
KPRSTLRALV QCFDRWAKLL EGRPHAEVAQ IILEESGYTE MWQKERTADA AGRLENLKEL
VRSLEEFPDL PAFLEHIALV MDANEAEGGD RVSLMTLHAA KGLEFDTVFL PGWEDGLFPN
QRALDESGRA GLEEERRLAH VGLTRARKRA KISFAVNRRI HGLWSSTMPS RFIDELPEAS
VSVIEAPANF SHGPSRFDRQ ATPFGSSYAT PGWQRAQAAT AGQERFGGQG RPGEPRFGEG
RGARGAPRQI EGTLVAKSTG TASDYVAGAR VFHTKFGPGS VAAVDGNKLT VDFDKAGRKM
VLDSFVQPT