Gene M446_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1078 
Symbol 
ID6131533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1201233 
End bp1202768 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content73% 
IMG OID641641369 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_001768041 
Protein GI170739386 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0468263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.981132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA CACTGGTTCG CAAGTCGTTG ATCAACGCCG TCGCGGGCGT GGCGACCACG 
TTCGCCGGCT TCGCGAGCAG CATTCTGGTG GCGCGCCTCA TCGGGGTCGA GGGATCCGGG
ATCATCGGGT TCGCGGTCTG GGCCGCCACG ATGTCCGTGA TGGTGGCGGA TCTCGGGATC
CCCGGCAGCC TCGCCCGCTT CCTGCCCGAG CTTCGCGCGC GCGCGAGCCT CGCCGATGCG
GACGGCCTGA CGCGCGCGCT CCTGCGTCCC TACCTCCTCG TCACCCTGTG CGTGTCCGGA
GGCTTCTTCG CCTACGCGGC CTCGCTCGCG GCCGCCCAGC CCGACGGGAT CGGCTGGCAG
ATCCACCAGG GCAGCTACCG CGCCTCGCCG CTGTTCTGGC TGCTCGTGGG GCTGGCCTGC
CTCACCCAGT CGCTGGCGAG CTTCGTGACC AGCTACCTGC GCGGCGTGCA GGATTTCGCG
GCGCTCGCGC GGCTCGCCCT GCTCGCCGCC GGCGCGCAGA TCGCGGCCAC GACGGTCGGA
ATCGTCGCGT TCGGCGTCGG CGGCGCCCTG GCGGGCGCCG TGATCGGATC GGCCGTCGTC
ATGCGCCAGG TCCTGCGGCT GCCGCGCGAG GGCAGCCCCG TTCCGCCGGT GCTGCGCGCC
CGCGTCGTCC GCTACTCCGT CGAGTCCTGG GCGAGCCACC TCGTCACGGC GTTCCTGTGG
TCGCGGATGG AGGTCATCTT CCTCGAGCGG AGCTTCGGCA GCCACGCGGT CGGGCTGTTC
ACCGTGAGCC TGACGCTGTC GAACCTCGCC ATGCAGGGGC CGCTGCTGCT CACCGGCGCG
CTGCTGTCGC ACCTCTCGCA ACATTCCGGA GCGGAGCACG CGGAGACCCG CCTGGCCCTC
TACCCGGCCA GCGTGCGTCT CCTCGCGCTG TTCGTATTCC CGCTCTGCCT GGGGACGGCG
GGTGTCATGC CGCTCCTGCT TCCCCTGCTC TTCGGCGACG CCTTCGCGCC GGCGGTGACC
GCCGCCACGA TCCTGGTCGG GACCGCGAGC CTGATCACGA TCGCCACCAT CGCGTACTCG
TACCTGTTCG CGATGGAGCG GACGAGCTTC ATCCTGGGAT CGGGGCTCGT CGGGGCCGTC
CTGGCGATCA CCGCCGGCCT CACGGTGGTT CCGGCCGCGG GCCTGCTCGG CGCGGCGAGC
GCGCGGGCCG CGATCCAGCT CCTCGTGACG GGCGCCATCG TCTGGTACGC TCGGCGGTCG
CTGGGCTGCG TGCTGCCCAC GCTCGATCTC GCGCGGATGT TCCTGGCGGC CCTGCTCTGC
GCGATCGCCG CCCGGATCGT CGTCACGGTG ACCTCGGGCG TGCCCGGGCT GATGCTGGCC
GTGCTCACGG GCGCCCTCGT CTACGCGGCC GCCCTGCGCG TCCTCAAGCC CCTGCCGCGC
GCCGACCTGC AGCGGGTGCG GGACGCGCTG CGCAACCTGC CCGTCCCGCT GCGCTCGGCC
GCCCTCGCGA GCCTGCGCGT GATCGCGCCG GCCTGA
 
Protein sequence
MAGTLVRKSL INAVAGVATT FAGFASSILV ARLIGVEGSG IIGFAVWAAT MSVMVADLGI 
PGSLARFLPE LRARASLADA DGLTRALLRP YLLVTLCVSG GFFAYAASLA AAQPDGIGWQ
IHQGSYRASP LFWLLVGLAC LTQSLASFVT SYLRGVQDFA ALARLALLAA GAQIAATTVG
IVAFGVGGAL AGAVIGSAVV MRQVLRLPRE GSPVPPVLRA RVVRYSVESW ASHLVTAFLW
SRMEVIFLER SFGSHAVGLF TVSLTLSNLA MQGPLLLTGA LLSHLSQHSG AEHAETRLAL
YPASVRLLAL FVFPLCLGTA GVMPLLLPLL FGDAFAPAVT AATILVGTAS LITIATIAYS
YLFAMERTSF ILGSGLVGAV LAITAGLTVV PAAGLLGAAS ARAAIQLLVT GAIVWYARRS
LGCVLPTLDL ARMFLAALLC AIAARIVVTV TSGVPGLMLA VLTGALVYAA ALRVLKPLPR
ADLQRVRDAL RNLPVPLRSA ALASLRVIAP A