Gene M446_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1060 
Symbol 
ID6131508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1176772 
End bp1178709 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content73% 
IMG OID641641353 
Producthypothetical protein 
Protein accessionYP_001768025 
Protein GI170739370 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCTG CCGTCACGCC GCCCTCCCTC CCGCCGGCCC GCGTCCCCCC GCCCTCCACG 
CCCGGCCCGT CCGGGCTCGC GACCCTGGCC GTCGCCGTGG TCGTGGTCGC CGCGCTCTAC
CTCGCGCGCG AGGTCTTCAT CCCCCTGGTC CTCGCCATCC TGCTGAGCTT CGTGCTCGCG
CCGGTGGTGA ATCTGCTGCG CCGCCTGCGC CTCGGGCGCG TGCCCTCGGT GATCGCGGCG
GTGCTCCTCG CCCTCGGGGT CATCCTGGCC ATCGGCGGCG TCATCGGCCT GCAGGTCGCC
GACCTCGCCA AGAACATCCC CGCCTACCAG AGCACGGTCC AGCGCAAGGT CTCGACCCTG
CAGGAGGGCG TGCTCGGCCG CGCCAACGAC CTCATCCGCC GCTTCAACCG GCAGGTCAGC
GAGGTCTCCA GCCAGGCGGC CGCGCCCGAC GCCGCCGGCG CCGCGGCGGG CGCGCAGGCG
CCCCGGGCCG TGCTGGTGAA GGTGCAGGAG CCGGACACCT CACCCCTGGT CCTGGCCGAG
AAGGTCCTGG GCCCGGTCGT CTCGCCGCTC ACCATGGTCG GCATCGTCCT GGTGGTCGTG
ATCTTCATCC TGATGCAGCG CGAGGACCTG CGCGACCGCC TGATCCGCCT GTTCGGGGCG
AGCGACCTGC ACCGCACGAC CATGGCCATG GACGACGCGG CGGGCCGGCT CGGCACCTTC
TTCCTGGCCC AGCTCGGCAT GAACGCCGCC TTCGGGGTCA TCGTGGGCGT CGGCCTCTGG
TTCATCGGGG TGCCGAGCCC GATCCTGTGG GGCGTGTTCT CGGCCCTGAT GCGCTTCGTG
CCCTATATCG GCGCGCTCAT CTCGGGCGTG TTCCCGGTGG CGCTCGCGGC CGCCGTCGAT
CCCGGCTGGT CGATGGCGCT CTGGACCGCC GCCCTCTTCC TGGTGGCCGA GCCGGTGTTC
GGGCAGGTTG TCGAGCCGCT GCTCTACGGC CACTCGACGG GCCTGTCGCC CTTCTCGGTG
ATCGTCTCGA CCCTGTTCTG GGGCTTCCTC TGGGGGCCGA TCGGCCTGAT CCTGGCCACG
CCCTTCACGG TCTGCCTCGT GGTGCTCGGC CGCCACGTGG AGCGGCTCGA ATTCCTCGAC
GTGCTGCTCG GCGACCGGCC GCCGCTGACG CCGGTCGAGA ATTTCTACCA GCGCATGCTC
GCGGGCGATC CCGACGAGGC GCAGGAGCAG GCGGAACTGC TGCTGAAGGA GCGCTCGCTG
TCCTCCTACT ACGACGAGGT GGCCCTCAAG GCGCTGCAGC TCGCCGCCAA CGACTACCAG
CGCGGGGTTC TCGGGCCCGC TCAGCTCGAC GCGATCCGGC AGCTGACGCA GGCGCTGGTG
ATGGAATTCG CCAAGCGCCC GGACGAGGTG CCGCAGGAGG CGCCGGAGGC GCCGGCCGGG
CAGCCGGGCG CCGAGGCCTC GCTGGCCGAG AAGGAGCACC CGAAGAACGA GGCCGTGCCG
GGCCGCGCGC CGCCGCCCGA GGCGCGGCCG CAGAGGTGGC GCGGCGAGGC CCCCGTCCTC
TGCATCGCGG GCCGCGGCCC GCTCGACGAG GCGGCCTCGT CCATGCTCGC CCAGCTGCTC
GGCAAGCACG GGCTCGGCGC CCGCGTCGTC CCGCACGAGG CGGTCAGCCG CGAGAAGGTG
CGCAACCTCG ACGTGAGCGG GGTGGCGATG GTGTGCATCT CCTACCTCGA CATCAGCGGG
AACCCGGCCC ATCTGCGCTA CCTGCTGCAG CGGCTGCGGG AGAAGGTGCC GGGCCAGCCG
ATCCTGGTCG GCCTCTGGCC CGCCGAGGAC GCGATCCTGA CCGACGCTGC GCTGCGCCGG
CAGGTCGGGG CGGATTACTA CGTCGTCTCG CTGCGCGAGG CGGTCGAGGC GTGCCTGGAG
GCCCTGCGGC AGGCCTGA
 
Protein sequence
MPAAVTPPSL PPARVPPPST PGPSGLATLA VAVVVVAALY LAREVFIPLV LAILLSFVLA 
PVVNLLRRLR LGRVPSVIAA VLLALGVILA IGGVIGLQVA DLAKNIPAYQ STVQRKVSTL
QEGVLGRAND LIRRFNRQVS EVSSQAAAPD AAGAAAGAQA PRAVLVKVQE PDTSPLVLAE
KVLGPVVSPL TMVGIVLVVV IFILMQREDL RDRLIRLFGA SDLHRTTMAM DDAAGRLGTF
FLAQLGMNAA FGVIVGVGLW FIGVPSPILW GVFSALMRFV PYIGALISGV FPVALAAAVD
PGWSMALWTA ALFLVAEPVF GQVVEPLLYG HSTGLSPFSV IVSTLFWGFL WGPIGLILAT
PFTVCLVVLG RHVERLEFLD VLLGDRPPLT PVENFYQRML AGDPDEAQEQ AELLLKERSL
SSYYDEVALK ALQLAANDYQ RGVLGPAQLD AIRQLTQALV MEFAKRPDEV PQEAPEAPAG
QPGAEASLAE KEHPKNEAVP GRAPPPEARP QRWRGEAPVL CIAGRGPLDE AASSMLAQLL
GKHGLGARVV PHEAVSREKV RNLDVSGVAM VCISYLDISG NPAHLRYLLQ RLREKVPGQP
ILVGLWPAED AILTDAALRR QVGADYYVVS LREAVEACLE ALRQA