Gene M446_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0989 
Symbol 
ID6134617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1110431 
End bp1111411 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID641641287 
Producthistone deacetylase superfamily protein 
Protein accessionYP_001767960 
Protein GI170739305 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC TGCACCTGAC GCATGCAGCC GCACTGGCTC ATCTTGCGCC TCTGGGCCAT 
CCCGAGCGAG CGGATCGCAT CCGGGTCGTC GAGCGAACCC TGGAACAGGA GCGCTTCGCG
GGCTTGGTCC GAGAGCAGTC GCCGCTCGTC GCGCGCACGG CCCTGATCCG CGCGCATGAC
GAAGCCTATG TCGCAGCCAT GATCGAGGGC CTCAGGCGGG GCGACTGTGT GCTGGCGGAT
GACGACACGC CTGCCTCGCC GGGCACCTTG GAGGCGGTCC TGCGCAGTGC CGGCGCTGCC
GTGCAAGCGG TCGACGAGGT CATGACCGGA CAGGTGCGGA ACGCCTTCTC GGCCATGCGT
CCGCCTGGCC ACCATGCCGG GCGCGCGCGC GCCACGGGCT TCTGCTTCTT CAACAACGTC
GCCGTCGCAG CCCGCCACGC TCAGGCCGTC CACGGCGCCG CGCGGATCGC CATCGTGGAC
TGGGATGCCC ATCACGGGGA CGGAACCCAG GAGATCTTCT GGAGCGACGC GAGCGTCCTC
TTCTGCTCGA CGCATCAGTG GCCTCTCTAC CCGGGTTCGG GTGCTGTGTC CGAGCGCGGC
GAACACGACA CGATCGTGAA TGTGCCACTC CCTCCCGGTG CTGACGGCAC GATGTTCCGC
GAGTCCCTCG ATGTGGCGGT GCTGCCCAGG ATCAGGGCCT TTCGCCCAGA CCTTATCCTG
ATCTCGGCCG GGTTCGACGC GCATTGGCGG GACCCGTTGT CGGACCTGAA CCTCACAGAA
GCAGATTTCG GCTGGGCGAC ACAGCGGCTC GTAGACATCG CCGACCAGGT GAGTGGGGCG
CGCATGGTAT CACTGCTGGA GGGCGGCTAT GATCTGATCG GCTTGGCGAG GTCGGCGGAG
GCCCACGTCG CGGCCCTGAT GGCCCCTCCC TCGCGTTCTA TCGGGTACTG GGAAGACTCG
CGGGCCCAGG CTTCTGCCTG A
 
Protein sequence
MTTLHLTHAA ALAHLAPLGH PERADRIRVV ERTLEQERFA GLVREQSPLV ARTALIRAHD 
EAYVAAMIEG LRRGDCVLAD DDTPASPGTL EAVLRSAGAA VQAVDEVMTG QVRNAFSAMR
PPGHHAGRAR ATGFCFFNNV AVAARHAQAV HGAARIAIVD WDAHHGDGTQ EIFWSDASVL
FCSTHQWPLY PGSGAVSERG EHDTIVNVPL PPGADGTMFR ESLDVAVLPR IRAFRPDLIL
ISAGFDAHWR DPLSDLNLTE ADFGWATQRL VDIADQVSGA RMVSLLEGGY DLIGLARSAE
AHVAALMAPP SRSIGYWEDS RAQASA