| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0940 |
|---|
| Symbol | |
|---|
| ID | 6133202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 1065429 |
|---|
| End bp | 1067549 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641641249 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001767923 |
|---|
| Protein GI | 170739268 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCCC GTTCCCGGGC CGCCCGCCGC GCCGCGGTGC TGCCGCTCGT CCTGCTCGCC
GGTCCCGGCC TCGCCCAGAC GTCCGACACG ACCATCGCCC TCTCCGAGAT CACCGTCGCC
GGGAGCGGGC CGCCGCCTTC CGGCTCCGTC ACGGTGCCGA GCGTCGCCGC CCAGCGCGCG
GCCGTGAACG CCACCGTGGG CTCGGTCGGC TTCGTGGATG CGGCGGAGTA CCAGAACACC
TACGCCAACA CGCTGCGGGA CGTGCTTCGG GACGTGCCCG GCGTCACCGT GCAGGAGCGC
TACGGCCAGG AGCTGCGCCT GTCCGTGCGC GGCTCGGGCG TCGCCCGCGG CTTCCACCTG
CGCGGGATCG AGCTCCTGCA GGACGGCATC CCGTTCAACC TCGCGGACGG GAGCGGCGAC
TTCTACCAGA TCGACTTGCC GGCCCTGCGC TCGCTGGAGA TCTACAAGGG CGGCGACGCG
TTCGCCTTCG GCGCCACCAC CCTGGGGGGC GCCGTCAACG CCGTCACGCC CACCGCCCAC
ACCGCCCTCG CGCCCACGCT CCTGCGCGTC GAGGGCGGCA GCTTCAACAC GGTCCGGGAG
AGCGTCCAGG TCTCGCGGAT CTCCGGCCCG GTCGACATCC TGGTCAACGG CACGGTCACG
AATTCGGACG GATACCGGCA GCACGAGGCG CAGGCGACCC GCAACCTCAA CGCCAATCTC
GGCTACCGGC TCGCGCCAGG CGTCGAGACC CGGTTCTTCT TCGGGACCTA CCTCACCGAC
CAGAAGCTGC CCGGCACGCT GACCCTGTCC GGCGCCCTCA CCGATCCGCG GACCGCGAGC
CCGACGGCGC TCAGCGGCAA CCAGTCCCGC AAGGTCGAGA CCGAGCGGAT CGCCAACCGC
ACCTCCTTCG TGCTCGAGGT CGGCAAGCTC GACATCGACA CCTGGGCGAT CCACAAGTCG
CTCTACCACC CGATCTTCCA GGTCATCGAC CAGGACGGCT GGACCTACGG GATCGCGCCG
CACTGGGCCG GCAGCGTCGA CCTCGGCGGC CACCGCAACG ACCTGCTGCT GGGCCTGCGC
GCCTTCGCGG GGCGGAACGC CGCCCGGCAA TTCGTGAACC TGGCCGGCCG GCGCGGGGCG
CAGACGCTCG ACGCCGTGCA GAGCGCCTCG AACTACGAGG CCTACGCGGA GAACCGCTTC
TGGATCCTGC CCGACCTCGC CCTGATGACG GGAGCGAAGC TGTTCTCCTC GAACCGCACC
TACAGCAACA AGGGCGGGCT CGCCCCGCCG AGCGCCGCCC CGGCCTTCGC CGACGAGACC
TTCGAGGGCG TCAACCCGAA GCTCGGCCTG CTCTGGCAAC CGCTGCCGGA GATCCAGGTC
TTCGGCGACG TCACCCGCTC GCGCGACGTG CCGGACTTCT CGGACCTCGT GCAGACGAAC
GCGCTCGGGA CCACCTTCGT GCCCCTCGCC GCGCAGCGCG CCTGGACCGT CGAGGCCGGG
ACGCGCGGCC GCATCGACCG CCTGTCCTGG GACGTGACCC TCTACCGGGC CGAGGTGCGG
GACGAACTCA TCAACTACGC GATCGCGCCC GGGCTCGGCA TCCCGGCCGC GACCTTCAAC
GCCCCGCGCA CCCGCCACCA GGGCGTCGAG GCGGCCTTCG GCCTCGACCT CGCCCGCGAC
CTCGCCGCGG AGGGCGACGC GCTCGTCCTG CGGCAGGTCT GGACGCACAA CGACTTCCGC
TTCCTGCACG ACCCGGTCTT CGGCAACGGG CGCATCGCCG GCATCCCGGA CGACGTGCTG
CGCACGGTGC TGCGCTACAC CCATCCGAGC GGGTTCTACG TCGCCCCCTC CCTCGACTGG
GTGCCGCGCG GGGCCTTCGC CGACCACGCC AACACCCTGC GCGTGCCGGG CTACGCGCTG
GTCAACCTGC AAGCCGGGAT CGACGTCGCG AACGGCGTGT CGGTGTTCCT GGACGCCCGC
AACCTGACGG ACGAGCGCTT CGTCTCGGAC ATCTCGGTCG TCGCCGACGC GCGCAAGGTC
GCGGGCGGGC CGGCGGCCCT GGCGGCCTTC TACCCGGGCA ACGGCCGCGC CGTCTTCGCG
GGCGTGCGGG CCGGGTTCTG A
|
|---|
| Protein sequence | MPPRSRAARR AAVLPLVLLA GPGLAQTSDT TIALSEITVA GSGPPPSGSV TVPSVAAQRA
AVNATVGSVG FVDAAEYQNT YANTLRDVLR DVPGVTVQER YGQELRLSVR GSGVARGFHL
RGIELLQDGI PFNLADGSGD FYQIDLPALR SLEIYKGGDA FAFGATTLGG AVNAVTPTAH
TALAPTLLRV EGGSFNTVRE SVQVSRISGP VDILVNGTVT NSDGYRQHEA QATRNLNANL
GYRLAPGVET RFFFGTYLTD QKLPGTLTLS GALTDPRTAS PTALSGNQSR KVETERIANR
TSFVLEVGKL DIDTWAIHKS LYHPIFQVID QDGWTYGIAP HWAGSVDLGG HRNDLLLGLR
AFAGRNAARQ FVNLAGRRGA QTLDAVQSAS NYEAYAENRF WILPDLALMT GAKLFSSNRT
YSNKGGLAPP SAAPAFADET FEGVNPKLGL LWQPLPEIQV FGDVTRSRDV PDFSDLVQTN
ALGTTFVPLA AQRAWTVEAG TRGRIDRLSW DVTLYRAEVR DELINYAIAP GLGIPAATFN
APRTRHQGVE AAFGLDLARD LAAEGDALVL RQVWTHNDFR FLHDPVFGNG RIAGIPDDVL
RTVLRYTHPS GFYVAPSLDW VPRGAFADHA NTLRVPGYAL VNLQAGIDVA NGVSVFLDAR
NLTDERFVSD ISVVADARKV AGGPAALAAF YPGNGRAVFA GVRAGF
|
|---|
| |