Gene M446_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0918 
Symbol 
ID6132025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1037148 
End bp1038056 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content75% 
IMG OID641641227 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001767901 
Protein GI170739246 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.523672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.981132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCGTC GTCCCATCCA TCGCCTGCCG CGTCGCGCGG CGCCCGCGCT CGCGGCCCTG 
CTGTGGGCGG CGCTCGCCGG CCCGGTCGCG GCCGAGACGG CGCCGAGCGC CGGCCTCGCC
GTCAGCGTCG CGCCGGCCAA GCGGCGCTGC TTCGACGACC GGGTCGACGT GACCGGCGTG
CTCGCCGCCC GCCAGGAGGT CCAGATCCGC CCCGAGCGGG ACGGGCTGCG CGTGCAGCAG
GTCGCCGTCC GGCCCCTCGA CGAGGTGCGG CAGAACCAGG TCCTCGCCCA GCTCGTCCCC
GACGACGGCT CGGTCAACCC GACCCCGATC CCGATCCGCG CCCCCGTCGC GGGCGTGGTC
GGCCGCAGCA CCGCCACGAT CGGCGGGCCC GCCCCGGCCC ATTCCGATCC GCTCTTCGTG
ATCATCGGGC AGGGCGAGAT CGAACTCGCG GCCGACGCGC CGATCACGGC GCTCGGGAAG
ATCGCCCCGG GCCAGCCCGT GACCGTGAAG CCCCTCGGCC TCGGCCCGAT CAGCGGCCGG
GTGCGGCTGG TCTCCCCCTC GACGGATGCG GCGAGCCAGC TCGGGCAGGT GCGCATCCTG
CTCAGCGCGA TCGGCGAGGC GCGGCTCGGC ATGTACGCCC GCGGCACCGT CTCGGTCGGC
GAGAGCTGCG GGATCGCCGT GCCCTTCTCC TCGCTGGTGA GCGGGCAGGA CGGCACCACG
GTCTACGTCG TCAGCCAGAA CCACATCGAG GCGCGCCCGG TCGCGGTCGG GCTGTTCTCG
GAGGACGAGG TCGAGATCCG CAGCGGCCTG TCCGAGAACG ACCTCGTGGT CGTGCGCGCC
GCCCCCTTCG TGCGCGAGGG CGACCTCGTC CGGCCGATCC GCGTCGGGGA GGGCCAGGCC
CTGAACTGA
 
Protein sequence
MSRRPIHRLP RRAAPALAAL LWAALAGPVA AETAPSAGLA VSVAPAKRRC FDDRVDVTGV 
LAARQEVQIR PERDGLRVQQ VAVRPLDEVR QNQVLAQLVP DDGSVNPTPI PIRAPVAGVV
GRSTATIGGP APAHSDPLFV IIGQGEIELA ADAPITALGK IAPGQPVTVK PLGLGPISGR
VRLVSPSTDA ASQLGQVRIL LSAIGEARLG MYARGTVSVG ESCGIAVPFS SLVSGQDGTT
VYVVSQNHIE ARPVAVGLFS EDEVEIRSGL SENDLVVVRA APFVREGDLV RPIRVGEGQA
LN