| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0916 |
|---|
| Symbol | |
|---|
| ID | 6132023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 1032023 |
|---|
| End bp | 1035457 |
|---|
| Gene Length | 3435 bp |
|---|
| Protein Length | 1144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641641225 |
|---|
| Product | outer membrane autotransporter |
|---|
| Protein accession | YP_001767899 |
|---|
| Protein GI | 170739244 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
|---|
| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.753371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGGG GCGGGCGCGA CCCGCCGACC GGCTCGCTGG GACGTGTTCG GGGGTGCGGG
ATGGTGACGC TGGGGTACGA AACGGGCCGC GCGCGCGGCC TTGCGCGGAT GAAGCGCCTG
CTGATGATCG GCGTCTCCTT CGCGGGGCTT CCGGTGCTGG CCGGCGCGGC CTACGCGCAG
AGCGTGGTGC CGGGCTTCGA CGCCAATCAG CTCGCCCGCA ACGACGACGG CTCCACCGGC
GAGGTGGCGC TGCCCTTCAC GGCCAACTTC TTCGGCACGA CCTACTCGTC GCTCTACGTC
AACAACAACG GCAACGTGAC GTTCGGGACG CCCCTGAGCA CGTTCACGCC GGTCGGCCTC
GGCGCCAATT ACCGCGGGGC GCCGATCATC GCGCCCTTCT TCTCCGACGT GGACACGCGC
AACCCGGCGA GCGGCATCAC CTCCTACGGC ACCGGCACCT ACGCGGGCCA GACCGCCTTC
GGGGTGACCT GGCCCTCGGT CGGCTACTTC TCGAACCATG CCGACAAGAC CAACACCTTC
CAGTTGGTCC TGGCCAGCCG CGCCGATACG GGCGGCGGCA ATTTCGACAT CTACTTCAAC
TACCAGCGCA TCCAGTTCGA GACCGGCGAC GCCAGCGGCG GCACGAACGG GCTCGGCGGC
ACCTCGGCCT CGGCCGGCTA CTCCGCCGGC ACCGGCGCGG CGGGCAGCTA CTTCGAGCTC
CCCGGCTCCC TCGTGAACGG CGCGCTCATC GATGGCGGGC CCAACTCGCT GGTGGCGGGC
TCGAACAACG GCGTCCCCGG GCAGTTCCTG TTCCCGGTCC GCAACGGCGT CGTCATGCTG
GCCAACGTCT GCCAGCCCGG GGACAACGCC TCGACCACGC AGATCGCCAA TTGCGGCCCC
AACCGGGCCT ACACGGGCGG CATCTTCTAC ACCCCGCTCG ACAAGTTCAC CCTGAACGTC
CTCGACAACA CCACGATCGC CGGCCCGCAG AACGCGGCCG CCGTGCTGGT GATGCCGACC
GCCGCGACCA CCGGCGCGAG CCCGGCCGGC AGCGTCGCGA TCAACGTCAA CGCCTCGGCG
ACGATCACGG CGCCGGGCGG CGCCGGCATC CAGATCGACA GCGGCTCCGG CACGGGCGCG
GGCAGCGTCA CCAGCGCCGG CACGATCACG GCCGCGACGG CGGGCATCCA GGCCGACACC
AACCGGGGCG CCCTCACGGT CGCGAATTCC GGCACGATCA CCGCGCCGCT CGGCATCTCG
GGCTCGTCGC GCACCACCAC CGCCCTGTCG AATTCCGGCA CCCTCAACGC GTCCTACGCG
GGCCTCGTCG GCGGGGGCTT CACCGGCACC GTCACCCTGA CCAACACCGG CACCGTCAAT
TACGGCCAGT TCGGCATCCT GGGCGGCAGC GCGGTCGCGC CGCTCGTGAT CTCCAACGCG
GGGGCGCTGA CCCAGTCCGC CACCGCCTCG GGCCCGCCCG CCACCGGCCT GCCGACCCTG
ATCGCCGGCT TCCTCCAGAC CAACGCCAAT CCGTCGGCGA TCTTCGCCCG CGCCGGCGGC
GCGATCAGCA TCGAGAACGG GGCGAACGGC ACCATCGCGG GCGCCAACGG CATCGACGCG
GCGGTGCTCA GCTCGGTCCC CGGCCTCCCG GCGACGGGCG CCGCCACCGG ACCCCTGACG
ATCACCAACC TCGGCACGAT CGACGTGCAG GGCGCCGCGA TCACGACCGC GGCGAGCGCC
GTGGCCAGCC AGGTGACCAA TGCCGGCACG CTGACCGGCT CCCTCGCCCT GTCGAGCGGC
TCGACCTTCA CCAACACGGC GAGCGGCCGC GTCAACGTCA CGGGCGCGAG CAGCTTCGGC
GGCGGCACGA TCACCAACGC GGGCGGGATC TCGCTCGCCT CGACCAGCCT GCAGAACCTG
TCGGGGTTCC AGAACCAGGG CTCGGGCCTG CTCATCGCCA CCGGCACCAG CAGCATCGGC
AGCCAGACTC AGGGCACCAG CTTCGTCAAT GCCGGCACGA TCAGCCTCGT GAACGGTCGG
GCGGGCGACA CGCTCACCAT CAACGGCAAC TACGTCGGGC AGAACGGGCG CCTGCTGGCG
GAGTTCAACA CCCAGACCAG CACGGGCGAC CGCCTGATCA TCAACGGCAA CGCCTCCGGC
ACGACCGGCG TCACCGTCAC CAACCTGACC GGGGCCGTCC CCTTCACCAC GGGCTCGCCG
ATCGTCACGG TCACCGGCAC CAGCGCCGCC AACGCCTTCA CGCTCGCGGG GGCGCAGAAT
TTCGGCACCC TCGAGGCGAT CCTGGTCGCG ACCACCGGCC AGGGCGGCAC CTCCGTGGCC
CTCGGCACCG TGCCGACCGC GGTCGGCCTC TCGGCCTCCA CGGCCGTGAT CGCGGCCCGC
ACCATCGCCT TCCAGGGCGG CTCGGCGGTG CTCGACCGGC TCACCCAGGT CCGCGACAGC
CTCAAGGCGG CGCCCGGCCA GACCGCCATC CCGCAGGCGA TGCAGTATAA CGGCCTGTCG
GCCTACTCGG CGCTCGTGAC CAAGGACCCG ATCGCCCCCA AGCTCGCCGA GCCCGCGCCG
CAGACCACCA CCCGGCCCGC CATCTGGGCC CGCGCCTACG GCGACATCGA GAGCCGCTCG
GGCTTCAGCA ACTTCTCCTT CGGCGGTCTC AACTTCACCC GCGACCTCGG CTACAGCCAG
GTCTCGGGCG GCTTCCTGGG CGGCACGGAC GTGGTCATCA GCGGGCTGAC CAAGCCCGAC
GACGGCCTGA TCCTCGGCGT GATGGGCGGC TACACGCTGG CGGGCGTCGA CCTCAACCGC
AATGCCGGGC GGCAGGATTA CGAGGGCGGC ACGGTCGGCG TCTACGGCAC CTACCTGAAC
GGCCCCTGGT TCTGGGACGC GCTGTTCAAG GTCGACCTGC TCGGCCTCGA CATCCGGGCG
CCGGGCGTGG TGCAGCGCAC GGGCCTGCAG AACTACAACT TCACCACCAA TGTCGGCTAC
CGGGTGCCGC TGGAGCACAA CATCTACGTC GAGCCGACGG CGGGCCTGGA ATACGTCTCG
ACGGTGTTCG ACCGCACGCC GGCGCTGGCG GTCGGGGCGG TCCCCCTGCG GGACGGCGAG
GCCCTGCGCG GCCGGATCGG GGCGCGGATC GGGACCGAGA TGGTCGAGGA CAACATCCGG
ATCGAGCCGA GCATCACGGG CTACGTCTAC AGCGTGCTGA CCGAGACCGG CACGGTGGGC
GCGTTCAACG GGATCACCGG GGTGACCGGC CTGCGGGAAG AGGGGAAGGT GCGCGGGGAG
GTCCAGGCCT CGATCAATTT CTTCAACCTC AAGACCGGGC TGTCGGGCTT CATCCGGGGC
GATTACCGGA TCGGCGGCGA CCTCGTCGGC GGCGGCGGCC GCGCCGGCAT CCGCTACCAG
TTCTCGACCT TCTGA
|
|---|
| Protein sequence | MGRGGRDPPT GSLGRVRGCG MVTLGYETGR ARGLARMKRL LMIGVSFAGL PVLAGAAYAQ
SVVPGFDANQ LARNDDGSTG EVALPFTANF FGTTYSSLYV NNNGNVTFGT PLSTFTPVGL
GANYRGAPII APFFSDVDTR NPASGITSYG TGTYAGQTAF GVTWPSVGYF SNHADKTNTF
QLVLASRADT GGGNFDIYFN YQRIQFETGD ASGGTNGLGG TSASAGYSAG TGAAGSYFEL
PGSLVNGALI DGGPNSLVAG SNNGVPGQFL FPVRNGVVML ANVCQPGDNA STTQIANCGP
NRAYTGGIFY TPLDKFTLNV LDNTTIAGPQ NAAAVLVMPT AATTGASPAG SVAINVNASA
TITAPGGAGI QIDSGSGTGA GSVTSAGTIT AATAGIQADT NRGALTVANS GTITAPLGIS
GSSRTTTALS NSGTLNASYA GLVGGGFTGT VTLTNTGTVN YGQFGILGGS AVAPLVISNA
GALTQSATAS GPPATGLPTL IAGFLQTNAN PSAIFARAGG AISIENGANG TIAGANGIDA
AVLSSVPGLP ATGAATGPLT ITNLGTIDVQ GAAITTAASA VASQVTNAGT LTGSLALSSG
STFTNTASGR VNVTGASSFG GGTITNAGGI SLASTSLQNL SGFQNQGSGL LIATGTSSIG
SQTQGTSFVN AGTISLVNGR AGDTLTINGN YVGQNGRLLA EFNTQTSTGD RLIINGNASG
TTGVTVTNLT GAVPFTTGSP IVTVTGTSAA NAFTLAGAQN FGTLEAILVA TTGQGGTSVA
LGTVPTAVGL SASTAVIAAR TIAFQGGSAV LDRLTQVRDS LKAAPGQTAI PQAMQYNGLS
AYSALVTKDP IAPKLAEPAP QTTTRPAIWA RAYGDIESRS GFSNFSFGGL NFTRDLGYSQ
VSGGFLGGTD VVISGLTKPD DGLILGVMGG YTLAGVDLNR NAGRQDYEGG TVGVYGTYLN
GPWFWDALFK VDLLGLDIRA PGVVQRTGLQ NYNFTTNVGY RVPLEHNIYV EPTAGLEYVS
TVFDRTPALA VGAVPLRDGE ALRGRIGARI GTEMVEDNIR IEPSITGYVY SVLTETGTVG
AFNGITGVTG LREEGKVRGE VQASINFFNL KTGLSGFIRG DYRIGGDLVG GGGRAGIRYQ
FSTF
|
|---|
| |