Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0910 |
Symbol | |
ID | 6130488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 1024788 |
End bp | 1026449 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641641219 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001767893 |
Protein GI | 170739238 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.354692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCGT TGTGGATTGT CGGCATCGTG CTCGCGTTCA GCGCGTGCCA GGCGATTCAA CCTGTCTTCG CCCAAAGCAG AGCGGGCGAC CGGATCGCTC TGGTGATCGG CAACGCGCAG TACCCGGACA GCGACACGGC CCTCACGACC CCGGTCGCGG ATGCCAGGGC CGTGGCGGCG GTCCTTCAGC AGAAGGGCTA CGCCGTGGAC GTCGGCGAGA ACATGGCGAA GGTCGCCCTG CAGGGCGCGC TCGGGCGCTT CTACGACAAG ATCAAGGCGG GCTCGACCGC GCTCCTCTAC TTCAGCGGGT ATGGGATCCA ATCGAACAAG CAGAATTACC TGATACCGGT CGATGCCCAG ATCTGGACCG AGCCGGATCT GCGGCGGGAC GGCTTCAACG TCGAGGGCAT CCTGAGCGAG ATGCAGAAGC GCGGCGCGGA CCTGAAGGTG GTGATCCTGG ACGCGGCCAA CCGCAACCCG TTCGAGCGGC GCTTCCGCAG CTTCGCCAAC GGGCTCGCGG CGACGGCCGA GGCTCCCCCG AACGCGCTCG TCTTCTACTC GACCCAGCCC GGCCAGATGC TGCGCCAGGC GACGGGCGCC CGCAGCCCCT TCGCCGAGGA ACTGGTCCGG CAGCTCGGCC AGAGCGACGG GATCAGCCGC GCGGTGTTCG ACCGGACCCG CTCCGCCCTG GCGGCGGGCC AGGGCGGGCA GACCCCCTGG ATCTACTCGA GCCTGCGGGA GGGGGCCCTC GCGAAGGACA CCCCGCCGCC CAAAGACCTT TCTGCCAAGG ACCTTTCTGC CAAGGACCAC TCTCCCAAGG ACTTCCCTGC CAAGGACTTC CCTGCCAAGG AGGGTCAGAC CCCGAAGGAG AGCCCGACCT GGGTGGATCC GCAGCAGGCC GGGAGGAGGC CCCCGCGCGA GGAGGCGCCG CCCGGGCCGG TGGCCGGCCG ACCGCCCGAG ACGCCGCGGG AGCCGCAGGC CGACCCGTCC GCCGAGTTCG CCGCCGCCCG AAAGGCCGGG ACCCGGGAGG CGATGGAGCG CTTCGCGGAC AAGTTCCAGG GCACCGCCTG GGGCGAGCGC GGCCGGGCCG AGCTGAAGCG GTTCGAGGAG CAGGCCAAGG TCGCCGCCCC GAAGGTGCCC CAGACCCCGC TGCCCTACAC CCGCGAGGAC GAGCGCCTGC GGGCCGAGCT CAACAAGGCC CTGGAGCGCA ACCCAGCCGA CGGGTCCGCC CTCTACCGGC GCGGCCAGCT CTACGCGATC CACCGCGAGT ACGCGCTCGC GCTGGCGGAC TTTGACGAGG TGATCCGCCT CAACCCACAG GACGTTGAGG CGCTCAATAA CCGCTGCTGG GTGCGCGCGA TGGTTGATGA ACTCGACCGG GCACTGCGCG ACTGCAACGA GGCGCTGAAG CTCAGACCCA ATTTCCCGGA CGCTCTCGAC AGTCGTGGAC TGGTCAACCT CAAGATAGGA CTTCCCGGTC TCGCCATCCG CGATTACGAT GCCGCGTTGA AGGGCAATGG TAAGCAGGCC TCGTCCCTGT ACGGCCGCGG GATGGCGCGG GTTCGGACCG GCGAGACGGA GGAGGGGAAG AGCGACATCA ACGATGCGCT CCGGATGGAT CCGGGCCTCG AGAGAGAGTT CGCCCAATAC GGAATCCGTT GA
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Protein sequence | MRALWIVGIV LAFSACQAIQ PVFAQSRAGD RIALVIGNAQ YPDSDTALTT PVADARAVAA VLQQKGYAVD VGENMAKVAL QGALGRFYDK IKAGSTALLY FSGYGIQSNK QNYLIPVDAQ IWTEPDLRRD GFNVEGILSE MQKRGADLKV VILDAANRNP FERRFRSFAN GLAATAEAPP NALVFYSTQP GQMLRQATGA RSPFAEELVR QLGQSDGISR AVFDRTRSAL AAGQGGQTPW IYSSLREGAL AKDTPPPKDL SAKDLSAKDH SPKDFPAKDF PAKEGQTPKE SPTWVDPQQA GRRPPREEAP PGPVAGRPPE TPREPQADPS AEFAAARKAG TREAMERFAD KFQGTAWGER GRAELKRFEE QAKVAAPKVP QTPLPYTRED ERLRAELNKA LERNPADGSA LYRRGQLYAI HREYALALAD FDEVIRLNPQ DVEALNNRCW VRAMVDELDR ALRDCNEALK LRPNFPDALD SRGLVNLKIG LPGLAIRDYD AALKGNGKQA SSLYGRGMAR VRTGETEEGK SDINDALRMD PGLEREFAQY GIR
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