| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0890 |
|---|
| Symbol | |
|---|
| ID | 6129192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 1002693 |
|---|
| End bp | 1003616 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641641200 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001767874 |
|---|
| Protein GI | 170739219 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGCT CGACCCTCGC ATCTCCTTCG GCTGAGGCGG CGCCCGCGCC CGCCGCCTCC
GGCCGGGACA CGTGGCGGCG CTTCCGCCGC CACCGGCTGG CGGTGGCGTC GAGCGTGATC
CTGGCGGTGC TGGTGCTGGG GGTCGTGTTC GGCGGGCTGC TCTGGCCGGT CGCCATCGAC
GACATCGACT TCTCGGCCAT GCTGCAGGGC CCCTCCGCCC AGCACCCCTT CGGCACGGAC
GATCTCGGCC AGGACCTGCT CGCCCGCATG ATCTACGGCG GGCGGATCTC GCTCGCGGTC
GGCTTCGCGG CGATGCTGGT GGCGACCCTC GTCGGCGTGG TGGTGGGATC GATCGCCGGC
ATGTCCCGCC GCCTGCTCGA TCCCGTCCTG ATGTGGGTGA CCGACCTGTT CCTGTCCCTG
CCGCAGCTGC CGCTGCTGCT GCTCGTGATC TATCTGTTCC GCGACCAGCT CAAGCAGGTC
TTCGGGATCG AGGGCGGCAT CTTCGTGATG GTGGTCGCGG TGATCGGGGG CTTGCGCTGG
ATGCCGGTGG CGCGGCTGGT GCGGGCGCAG TTCCTGTCCC TGCGCGAGAA GGAATTCGTG
GAGGCGGCGC GCGCGCAGGG GGCGGGGCCG CTGCACCAGG TGACGCGCCA CATCCTGCCG
AACGCGCTCG GACCCGTGAT CGTGGCGGCC ACGATCGAGG TCTCGGCGGC GATCATCGCC
GAATCGACCC TCTCCTTCCT GGGCCTCGGC TTCCCGCCCG ACATCCCGAC CTGGGGCCGC
CTCCTGTTCG ACGCCAAGGA CCACCTCGAC GTCGCCCCGC ACTGGGCGCT GTTCCCGGGC
GCGGCGATCT TCCTGACCGT CCTGTCGATC AACTTCATCG GCGACGGCCT CAGGGACGCG
CTCGACCCGC GGCGGGTGCT GTGA
|
|---|
| Protein sequence | MAGSTLASPS AEAAPAPAAS GRDTWRRFRR HRLAVASSVI LAVLVLGVVF GGLLWPVAID
DIDFSAMLQG PSAQHPFGTD DLGQDLLARM IYGGRISLAV GFAAMLVATL VGVVVGSIAG
MSRRLLDPVL MWVTDLFLSL PQLPLLLLVI YLFRDQLKQV FGIEGGIFVM VVAVIGGLRW
MPVARLVRAQ FLSLREKEFV EAARAQGAGP LHQVTRHILP NALGPVIVAA TIEVSAAIIA
ESTLSFLGLG FPPDIPTWGR LLFDAKDHLD VAPHWALFPG AAIFLTVLSI NFIGDGLRDA
LDPRRVL
|
|---|
| |