Gene M446_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0746 
Symbol 
ID6132208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp855525 
End bp856238 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content75% 
IMG OID641641063 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001767738 
Protein GI170739083 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG ACCACGACAC TCCGACAGGG CGGGACCGGG CAGCGGCGGT CCCGGGCGAG 
GGGCGCCCGC TCCTGCCCCG CTCCGTTCAC GCCCATCTCG GCCGGCAGCT GCAGGCCGTC
TACGGCGCCC TCCTGGCCGA GCGCCAGCCC CAGCTGCTGC TCGACCTGGT CGCGCGGCTC
GAGGTGGCGC TGGACGGGCA GCCGGCGTCG CGCTTCCGCG AGGATCTGCT CGAGGCCCTC
CCGGCCCTGC GCGCCTTCGC CGTGTCGCTG ACGGCGAACG TGGTCCAGGC GGACGACCTC
GTGCAGGAGA CGCTGCTGCG GGCCTGGCAG AACCAGGACC GCTTCGCGCC CGGCACCAAC
CTGAAGGCCT GGCTGTTCAC GATCCTGCGC AACCAGTTCT ACACTGTGGC GCGCAAGCGC
CGGCGCGAGG TGGAGGACGC GGACGGCGAG CAGGCCGCCC GCATGGTCGC GCTGCCCGAC
CAGGAGGACG GCATCGAGCT GCGGGACGTC TGGATGCGGC TGAGCCAGCT GCCGACCCCG
CAGCGCGAGG CCCTGCTGCT CGTGGGGGCG CAGGGCCTGA CCTACGAGGC CGCGGCGGCG
CTGATGGGCT GCCAGGTCGG CACCGTGAAG AGCCGCGTCA ACCGCGCGCG GGCGGCGCTG
GCGCAGGCCC TCGGCTACGA GGGCGGCCGG TCGGGCCGCT CGGCCGCGCT CTGA
 
Protein sequence
MAFDHDTPTG RDRAAAVPGE GRPLLPRSVH AHLGRQLQAV YGALLAERQP QLLLDLVARL 
EVALDGQPAS RFREDLLEAL PALRAFAVSL TANVVQADDL VQETLLRAWQ NQDRFAPGTN
LKAWLFTILR NQFYTVARKR RREVEDADGE QAARMVALPD QEDGIELRDV WMRLSQLPTP
QREALLLVGA QGLTYEAAAA LMGCQVGTVK SRVNRARAAL AQALGYEGGR SGRSAAL