| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0671 |
|---|
| Symbol | |
|---|
| ID | 6132948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 778423 |
|---|
| End bp | 780027 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641640990 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001767665 |
|---|
| Protein GI | 170739010 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGGC TTGCGGCGGC GGGAACGGCC CTGCTGCTCA CCCTCGCGGG GGCGGTCCTC
GCCCAGACGC CGAAGGCGGG CGGCGTCGCC CAGGCGCCGA AGGCGGGCGG CATCGCCCAA
GTGCCGAAGG CGGGCGGCAT CGCCAACGCG ATCATCCAGC CCGAGCCGCC GGGGCTGATG
CTCGGCCTGC TGCAGAACGG CCCGACCCAG ATGGTGGCCG GCAACATCTA CGAGGGGCTG
CTGCGCTACT CCGAGAGCCT CGAGCCGCGG CCCGGCCTCG CCGAATCCTG GGAGGTCGGC
CCGGACGGCC GGACCTACAC CTTCCACCTC GTGCGGAACG CCACCTGGCA CGACGGCAAG
CCGTTCACCG CCGAGGACGT GCTGTTCTCG GTCGAGTTCC TCAAGCAGAC CCATCCGCGC
GCCCGGGCCA ACATGGCCAA GGTCGCGAGC CTCACGGCGC CCGACCCCTA CACGGTGGTG
TTCACGCTCT CGGAGCCGTT CGGCCCCTTC CTGGGCGTGT TCGAGGTCGG CTCGCTGCCG
ATGATCCCCA AGCACCTCTA CGCGGGCACC GACTACAAGA CCAACCCGGC CAACACCACC
CCGATCGGCA CCGGCCCGTT CCTGTTCAAG GAATGGAAGA AGGGCGCCTA CATCCGGCTG
GTCAAGAACC CGGCCTACCA CGTGGCGGGA CGGCCCTACC TCGACGAGAT CTACTGGCAC
GTGATCCCGG ACGCCGCCTC GCGGGCGGTC GCCTTCGAGA CCGGCAAGGT CGACATCCTG
CCGGGCGGCT CGGTCGAGAA TTTCGACGTG CCGCGGCTGT CGCAGCTGAA GGGCGCCTGC
GTGACCGGCA AGGGCTGGGA GTTCTTCGGC CCCCATTCCT GGCTCTGGCT CAACAATCGC
CAGGGCCCGA CCGCCAGCAA GGCCTTCCGG CAGGCGGTCT CCTACGCGAT CGACCGCGAC
TTCGCCCGCG ACGTGATCTG GAACGGGCTC GGCAAGCCGG CGATCGGCCC GATCTCCTCC
TCGACGCGCT TCTTCAACCC GGGCCTCGGC CGGTACGCCT ACGACCCCGC CAAGGCGAAG
GCGCTGCTCA AGGAATCCGG CTACAAGGGC GAGACCCTGC GCCTCCTGCC GGTGCCCTAC
GGCGAGACAT GGCAGCGCTG GGCCGAGGCG GTGAAGCAGA ACCTGGAGGA TGTCGGCATC
AGGACCGAGA TCGTCGCCAC CGACGTCGCC GGCTGGAACC AGAAGACCTC GGACTGGGAC
TACGACATCG CCTTCACGTA CCTCTACCAG TACGGCGACC CGGCGCTCGG CGTGGCGCGC
AACTACGTCT CCTCGCAGAT CGCCAAGGGC TCGCCGTTCA ACAACGTCGA GGGCTACGCC
AATCCGGCGG TCGACGAGGC CTTCGCGCAG GCCGCGGCGG CGGTGAGCCC CGCCGAGCGG
CAGGCCCTGT ACGACCGGGC CCAGACGACC CTGATCGAGG ACGCGCCGGT GGCGTGGCTG
CTCGAACTCC AGTTCCCGAC CATCACCCGC TGCAAGGTGC ACGACCTCGT CACCACCGGG
ATCGGCGTGA ACGACGGCTT CCGCGACGCC TGGATCGAGC GCTGA
|
|---|
| Protein sequence | MIRLAAAGTA LLLTLAGAVL AQTPKAGGVA QAPKAGGIAQ VPKAGGIANA IIQPEPPGLM
LGLLQNGPTQ MVAGNIYEGL LRYSESLEPR PGLAESWEVG PDGRTYTFHL VRNATWHDGK
PFTAEDVLFS VEFLKQTHPR ARANMAKVAS LTAPDPYTVV FTLSEPFGPF LGVFEVGSLP
MIPKHLYAGT DYKTNPANTT PIGTGPFLFK EWKKGAYIRL VKNPAYHVAG RPYLDEIYWH
VIPDAASRAV AFETGKVDIL PGGSVENFDV PRLSQLKGAC VTGKGWEFFG PHSWLWLNNR
QGPTASKAFR QAVSYAIDRD FARDVIWNGL GKPAIGPISS STRFFNPGLG RYAYDPAKAK
ALLKESGYKG ETLRLLPVPY GETWQRWAEA VKQNLEDVGI RTEIVATDVA GWNQKTSDWD
YDIAFTYLYQ YGDPALGVAR NYVSSQIAKG SPFNNVEGYA NPAVDEAFAQ AAAAVSPAER
QALYDRAQTT LIEDAPVAWL LELQFPTITR CKVHDLVTTG IGVNDGFRDA WIER
|
|---|
| |