Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0623 |
Symbol | |
ID | 6135112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 725709 |
End bp | 726461 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641640943 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001767618 |
Protein GI | 170738963 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.511458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00478886 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGACCCG ACCTTCTCGG CCCGCTCGCC GATGACGAGC CACCTGCCGC GGCCGCGGCC GCGTCCCTGT CCCTGCGGCT GCGGGCGGAC GGCTCCCTGG ACGGGCGTCC CGACCTCCCG CCCTTCCTGC GCGACCATCT CGGCCGGCAC CTGCGGGCCT GCTACGCGGC GCTCCTGGCC GAGGCTCAGC CGGAACCGCT CCTGGCGCTG GTGGCGCGGC TCGACGCGGC CCTCGCGGCG GCGCGGCCGG CCTCTTCCTT CCGGGACGAA CTCGTGGCGT CCCTGCCCTG CCTGCGGGGC TTCGCCGTGT CGCTGACGGC GAACGTGGTC CAGGCGGACG ACCTCGTGCA GGAGACGCTG CTGCGGGCCT GGCAGAGCCA GGACCGCTTC GCGCCCGGCA CCAACCTGAA GGCGTGGCTG TTCACGATCC TGCGCAACCA GTTCTACACT GTGGCGCGCA AGCGCCGGCG CGAGGTGGAG GACGCGGACG GCGAGCAGGC CGCCCGCATG GTCGCGCTGC CCGACCAGGA GGACGGCATC GAGCTGCGGG ACGTCTGGAT GCGGCTGAGC CAGCTGCCGA CCCCGCAGCG CGAGGCCCTG CTGCTCGTGG CGGTGCAGGG GCTCAGCTAC GAATCCGCCG CCCGGATCAT GCAGTGCCAG GTCGGCACGG TGAAGAGCCG GGTCAGCCGC GCCCGCACCG CCCTGGCCCA GGCGCTCGAG GGCGGGGCGG CGCTCGGCGG CGCCTCGCCC TGA
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Protein sequence | MRPDLLGPLA DDEPPAAAAA ASLSLRLRAD GSLDGRPDLP PFLRDHLGRH LRACYAALLA EAQPEPLLAL VARLDAALAA ARPASSFRDE LVASLPCLRG FAVSLTANVV QADDLVQETL LRAWQSQDRF APGTNLKAWL FTILRNQFYT VARKRRREVE DADGEQAARM VALPDQEDGI ELRDVWMRLS QLPTPQREAL LLVAVQGLSY ESAARIMQCQ VGTVKSRVSR ARTALAQALE GGAALGGASP
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